Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1861 ATGGCAAGCACAAGGAGCAGCGCAAGAGTTGGAGCAGGAGCAAGAACAAGCTCATCACGAGGTCCTGTTGTTGAAGAGATCGTGCCCAGTTCTGGTTGGACAGAGGATTCTGCAGGACATTATCTCTTGGTGGATCTTCCAGAATTCAAGAAGGAAGAGGTGAAACTTCAGATTGATAGCTATGGTCGTATAATTGTTAAAGGAGAAAGGCACCCAAATGAGCGGAAACGAGTCCGATTTCATTTGACCTTTCCGGTGCCGGTGGATTCCGATACTGATAAAGTAGCCGGAAGATTCGATGCTGGAATCCTTTACGTGACTGTCCCCAAAGTGAGCAAAGAAAGTGAGGCTGTGAAAGCAGCAAACGGAACCGTTGAAAGAGCAGAAGAAAACAAAAGGCAAGAGCAAGCTGCAAATGGCAATGCTGAAAGAGAAGAACAACATGAACGCCAAGAACCCATTGTTGATGATAATGTGGGGAGAGATCGCACCCAAGAAGACAGTAACAGGGAGAAGGAAGTAAAAAGAAACGAGAATGCACAAATTGGGGAGTTTTCTGAAGGAATGTTAAGGAAGTGGGAGCATGAGCCTATGGTAAGAAGTGTAGTTGAGGTTTTCAGGAAAAACAAAGGAATTGTTATAACTGCTGTTATAGCATTTTCCTTGGGGATTTTAATATCTCGCAAGTTTCAATCCTCTGCACCATCTTAA 711 0.4416 MASTRSSARVGAGARTSSSRGPVVEEIVPSSGWTEDSAGHYLLVDLPEFKKEEVKLQIDSYGRIIVKGERHPNERKRVRFHLTFPVPVDSDTDKVAGRFDAGILYVTVPKVSKESEAVKAANGTVERAEENKRQEQAANGNAEREEQHERQEPIVDDNVGRDRTQEDSNREKEVKRNENAQIGEFSEGMLRKWEHEPMVRSVVEVFRKNKGIVITAVIAFSLGILISRKFQSSAPS* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1861 236 CDD ACD_sHsps-like 33 110 - -
Ahy11g1861 236 Pfam Hsp20/alpha crystallin family 34 116 IPR002068 -
Ahy11g1861 236 Gene3D - 5 121 IPR008978 -
Ahy11g1861 236 PANTHER INACTIVE PROTEIN RESTRICTED TEV MOVEMENT 2-LIKE 15 233 - -
Ahy11g1861 236 MobiDBLite consensus disorder prediction 123 180 - -
Ahy11g1861 236 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 22 128 IPR002068 -
Ahy11g1861 236 SUPERFAMILY HSP20-like chaperones 25 113 IPR008978 -
Ahy11g1861 236 Coils Coil 111 145 - -
Ahy11g1861 236 MobiDBLite consensus disorder prediction 115 180 - -
Ahy11g1861 236 MobiDBLite consensus disorder prediction 1 23 - -
Ahy11g1861 236 PANTHER HEAT SHOCK PROTEIN 26 15 233 IPR045045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1861 Ahy-Chr11 121025659 121029190 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1861 - - ccaj:109807613 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1861 11 121025659 121029190 Ahy11g1861 11 121025659 121029190 ECH
Ahy11g1861 11 121025659 121029190 Ahy1g2993 1 111752726 111756254 hybridization