Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1749 ATGCGATCGTCTCCTTCCTTCATTGCCTTTTCTCTGTTATTCATCGCACTCCTACCATCTATTCAGGCACACGCACCGATTAACGCTCACTTCAAATCTCTTTCGCCGTTTTCCTCCGCTCTCGAAACCCTCCAGAAACAGCTAGGTTACACTTTCAAGAAAATTGGGCTTCTTCGCCGTGCCATGACCCATGCTTCGTTCTCTGAGGAGAACAACAAAGCCTTGGCAGTTTTGGGCGGCAGTGTCATCGAAACCGCCGTGTCCTTCAAGCTTCTGTCCAAGGACATTGATGTTTCGGCTTCTGAGCTGAACAAAATGGTATCTCGAGTCTCAAATGTGGAATCTTCTTGTGCCGTCGATGGAACGCGGCTGAGCTTGCACAAGGTGGTTAGAGTTGCTCCCAATACCAACGCTTCTGCGCCTTCTGTGGTTTGCGGCGCGTTTCGAGCTATCTTTGGTGGCATTGCTATTGATACCGGAAATTCAGATGACGCAGGAAGTGTTTTCTGGAACCTTCATGGTGATCTTCTTGGCAATGCACTATCAATGTGA 552 0.4873 MRSSPSFIAFSLLFIALLPSIQAHAPINAHFKSLSPFSSALETLQKQLGYTFKKIGLLRRAMTHASFSEENNKALAVLGGSVIETAVSFKLLSKDIDVSASELNKMVSRVSNVESSCAVDGTRLSLHKVVRVAPNTNASAPSVVCGAFRAIFGGIAIDTGNSDDAGSVFWNLHGDLLGNALSM* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1749 183 ProSiteProfiles Ribonuclease III family domain profile. 41 160 IPR000999 GO:0004525|GO:0006396
Ahy11g1749 183 Gene3D Ribonuclease III domain 39 179 IPR036389 GO:0004525|GO:0006396
Ahy11g1749 183 CDD RIBOc 57 160 IPR000999 GO:0004525|GO:0006396
Ahy11g1749 183 SUPERFAMILY RNase III domain-like 35 174 IPR036389 GO:0004525|GO:0006396
Ahy11g1749 183 SMART riboneu5 56 182 IPR000999 GO:0004525|GO:0006396
Ahy11g1749 183 PANTHER RIBONUCLEASE 3 21 161 - -
Ahy11g1749 183 Pfam Ribonuclease-III-like 57 162 IPR000999 GO:0004525|GO:0006396
Ahy11g1749 183 PANTHER RIBONUCLEASE III 21 161 IPR011907 GO:0003723|GO:0004525|GO:0006364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1749 Ahy-Chr11 112067625 112068662 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1749 - - ahf:112695617 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1749 11 112067625 112068662 Ahy11g1749 11 112067625 112068662 ECH
Ahy11g1749 11 112067625 112068662 Ahy1g1665 1 87187253 87190136 hybridization