Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1742 ATGGCTGACCTTAATCTAGCAAGACTAATTATCGGAATAATTGGAAATGTCATCTCTTTTTGTTTATTCATGTCACCAATGCCTACATTTGTGCAAATATGCAAAGCAAAATCAGTGCAAGATTTCAAGCCAGATCCTTATGTAGTGACAGTACTGAATTGTGCAATGTGGTCATTCTATGGAATGCCATTCGTGACCAAAAATAACGTTCTTGTTCTCACAATCAATGGCTTTGGCTTCTTCCTTGAGCTCTTCTACACTGGCATCTTCCTTGCATTCTCACCTTGGGGTAAAAGGAGGAAGATTCTGCTAGCCCTTTTAGCCGAGGCCATCTTCGTTGCTTTGGTGGTATTTTTTGTGTTGTATTTCGTTGAATCCTTGAAGGAAAGAGCCTTAATTGTTGGACTCATATGCATTTTCTTCAACATCCTTATGTACTTTTCACCCTTGACCGTCATACGTCAAGTAATCAAAGACAAAAGTGTGAAGTACATGCCTTTCTGCCTTTCCCTTGCTAACTTCTGCAACGTCGTCTGGACGGTATATGCATGTCTTAAATGGGATCTTTTCATTCTGATTCCAAATGCCTTAGGAGCACTTTCAGGATTGGTGCAACTTATTCTCTATGCTGTTTTCTACCGATCAACCAACTGGGACCAAGAAAGCGCAATCGAAGTATAG 681 0.4038 MADLNLARLIIGIIGNVISFCLFMSPMPTFVQICKAKSVQDFKPDPYVVTVLNCAMWSFYGMPFVTKNNVLVLTINGFGFFLELFYTGIFLAFSPWGKRRKILLALLAEAIFVALVVFFVLYFVESLKERALIVGLICIFFNILMYFSPLTVIRQVIKDKSVKYMPFCLSLANFCNVVWTVYACLKWDLFILIPNALGALSGLVQLILYAVFYRSTNWDQESAIEV* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1742 226 Pfam Sugar efflux transporter for intercellular exchange 10 95 IPR004316 GO:0016021
Ahy11g1742 226 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016021
Ahy11g1742 226 Gene3D - 129 217 - -
Ahy11g1742 226 Gene3D - 7 95 - -
Ahy11g1742 226 PANTHER RAG1-ACTIVATING PROTEIN 1 6 222 - -
Ahy11g1742 226 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET5 6 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1742 Ahy-Chr11 111850579 111853122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1742 1 193 Miscellaneous Gene Families AT5G62850 58.247 8.77e-80 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1742 K15382 - gmx:100810948 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1742 11 111850579 111853122 Ahy11g1742 11 111850579 111853122 ECH
Ahy11g1742 11 111850579 111853122 Ahy1g1659 1 86826644 86828650 hybridization