Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1421 ATGAATATGGCATTTCTGAGAACAGTGGCAACTACCACTACCACTGCTATTGCTGCATCTGCTATTCCTGCTGCTTTCGCCTTTTCTTCTCTATCCTCTTCTACTTCTTCTTCTCCTTCTCAATCTTCCAAATCGCCAAACTCACCCTTCTCTCTCAACCCCAACCGATTCGGCCTCGTTAAAACATTTGCTGCCCCGCCCTCCCCTCTCCAAATGGACCACAACACTGCTTCTCAGAACCATCATTCTTCCTTGCCGGAGTTACTGACGGAGTACATGGTGGATATGAAGTGTGAAGGTTGTGTTAATGCTGTTAAAAACAAGTTGCAGACCATCAATGACTTCTTAATATCTGCCGCTGTTTCTGAATTCAAAGGTCCAGACATTTTTGGAGTTGTTCGCCTAGCTCAAGTAAACATGGAACTAGCTAGGATTGAAGCCAACTTCAGTGGTTTGTCACCAGGAAAGCATGGTTGGTCCATTAATGAGTATGGGGACCTGACTAGAGGTGCAGCTAGCACTGGTAAAGTATACAATCCAACAGACGGGGAAGATGCTAAACAGCCACTTGGCGACCTGGGAACATTAGAAGCTAACGAAAAGGGCGAAGCCTTCTACACTGGGGTCAAAGAAAAGCTCAAGGTAGGTGATCTTATTGGACGATCAGTGGTTGTATATGCAACTGAAAACAAATCAGAACATGGTATAGCTGCTGCTGTAATCGCCAGAAGTGCAGGGGTGGGAGAGAACTACAAAAAACTCTGTACATGTGATGGCACCACCATTTGGGAGGCAAGTGACAGAGATTTTGTCACAAGCAAGGTCTGA 828 0.4565 MNMAFLRTVATTTTTAIAASAIPAAFAFSSLSSSTSSSPSQSSKSPNSPFSLNPNRFGLVKTFAAPPSPLQMDHNTASQNHHSSLPELLTEYMVDMKCEGCVNAVKNKLQTINDFLISAAVSEFKGPDIFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEYGDLTRGAASTGKVYNPTDGEDAKQPLGDLGTLEANEKGEAFYTGVKEKLKVGDLIGRSVVVYATENKSEHGIAAAVIARSAGVGENYKKLCTCDGTTIWEASDRDFVTSKV* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1421 275 Pfam Copper/zinc superoxide dismutase (SODC) 131 234 IPR001424 GO:0006801|GO:0046872
Ahy11g1421 275 PANTHER SUPEROXIDE DISMUTASE CU-ZN -RELATED 112 275 IPR024134 -
Ahy11g1421 275 PANTHER COPPER CHAPERONE FOR SUPEROXIDE DISMUTASE, CHLOROPLASTIC/CYTOSOLIC 112 275 - -
Ahy11g1421 275 Gene3D Superoxide dismutase, copper/zinc binding domain 108 243 IPR036423 GO:0006801|GO:0046872
Ahy11g1421 275 SUPERFAMILY HMA, heavy metal-associated domain 90 122 IPR036163 GO:0046872
Ahy11g1421 275 SUPERFAMILY Cu,Zn superoxide dismutase-like 112 267 IPR036423 GO:0006801|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1421 Ahy-Chr11 55933612 55937277 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1421 K04569 - gmx:547617 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1421 11 55933612 55937277 Ahy11g1421 11 55933612 55937277 ECH