Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1389 ATGGCTTTGTTTAGAGCTCTTGTGCTCTTCTTCTTCTTCTTCTTCCTAACCAACGTTTCTCTGCTTCTCAACTTCACTAACGCTGAGGATCCATTTGCTTTCTACAACTTTGAGGTCACTTACCTCACTGCTTCTCCTCTTGGAGTTCCTCAACAGGTCATTGCTATAAACGGCAAGTTTCCAGGTCCAACCATCAATGTGACCACAAACAACAACGTTGTTGTCAATGTCCGGAACAAGCTTGATGAGAACCTCCTCCTTCACTGGTCTGGGGTTCAACAAAGAAGAAGTTCTTGGCAAGATGGTGTTCTTGGCACAAACTGTCCAATTCCTCCAAAGTGGAACTGGACTTACCAGTTTCAGGTTAAGGATCAGATTGGAAGCTTCTTCTACTTCCCTTCACTTAATATGCAGAGAGCAGCTGGTGGATTTGGTGGATTCATTATAAACAACCGACCCATTATTCCAATTCCTTTTGACACCCCACATGGGGACATTGTCATTATGATTGGCGATTGGTACACTCGCAATCACACGGATTTGAGGAAGGACCTTGATGCTGGAAAAGATCTTGGGATGCCTGATGGTGTTCTCATAAATGGAAAGGGTCCTTATAGATATAATGATACACTTGTTCCCGACGGCATTGATTTTGAGCAGTTTGATGTCCATCCTGGGAAAACTTACCGACTTCGTGTACATAATGTTGGAGTGTCAACAAGTCTGAATTTCAGGATCCAGAGCCATAATTTACTTCTAGCAGAGAGTGAGGGATCGTATACAGTGCAACAGAATTACACTAGCTTAGATATTCATGTTGGACAGTCGTATTCTTTTCTGGTAACCATGGATCAGAACGCAAGTTCAGATTACTATATCGTTGCAAGCGCCAGGTTTGTGAACGAATCACGCTGGCAAAGAGTAACCGGAGTTGGTATCTTACGCTATACAAATTCCAAGGGTAAGGCGCATGGTCCTCTTCCACCACCTCCAGATGATGAATTTGACAAGACTTTCTCAATGAACCAAGCAAGATCCATCAGATGGAATGTATCAGCAAGTGGTGCTCGTCCCAACCCACAAGGGTCTTTCCGATATGGTTCCATCAATGTGACCGAAATTTATGTACTAAGAAACAAGCCAAGAGAGAAAATCAACGGGAAGAATCGAGCAACACTCAGTGGCATCTCTTTTGTCAATCCTTCCACTCCAATCAGGCTTGCTGACAAGTACAAATTAAAAGGAGTATACAAGCTTGATTTCCCCACCAATCCTATAACTGGACCACCTCAGGCCAAGACATCGGTGATTAATGGAACTTACAGGGGATTTATGGAGATTATACTGCAAAACAACGACACCAAGATGCATTCCTATCACTTGGATGGTTATGCCTTTTTTGTTGTCGGGATGGATTATGGTGAGTGGACTAATAATAGCAGGGGCACATATAACAAATGGGATGGAATAGCTCGCACCACAGCACAGGTTTATCCCGGAGCATGGACAGCAATTTTAGTCTCGCTCGACAATGTCGGAGTTTGGAATCTCAGAACAGAAAACCTCGACAACTGGTATCTCGGTCAAGAAACATACATCAGAGTTGTCAATCCAGAGGCTAACAACAAGACTGAGCTTCCCATGCCAGACAATGCCCTTTTCTGCGGCGCCCTTGGGAAACTGCAGAAGCCTCAAGATATTAGTGCCGGTGCATCAATCGGTAAGAATACAGTGAAGCTGTTGTTCACTTGGCTGGTGTTTGTATGCGCCTTGATCCCCATTTTCTAG 1788 0.4407 MALFRALVLFFFFFFLTNVSLLLNFTNAEDPFAFYNFEVTYLTASPLGVPQQVIAINGKFPGPTINVTTNNNVVVNVRNKLDENLLLHWSGVQQRRSSWQDGVLGTNCPIPPKWNWTYQFQVKDQIGSFFYFPSLNMQRAAGGFGGFIINNRPIIPIPFDTPHGDIVIMIGDWYTRNHTDLRKDLDAGKDLGMPDGVLINGKGPYRYNDTLVPDGIDFEQFDVHPGKTYRLRVHNVGVSTSLNFRIQSHNLLLAESEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARFVNESRWQRVTGVGILRYTNSKGKAHGPLPPPPDDEFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEIYVLRNKPREKINGKNRATLSGISFVNPSTPIRLADKYKLKGVYKLDFPTNPITGPPQAKTSVINGTYRGFMEIILQNNDTKMHSYHLDGYAFFVVGMDYGEWTNNSRGTYNKWDGIARTTAQVYPGAWTAILVSLDNVGVWNLRTENLDNWYLGQETYIRVVNPEANNKTELPMPDNALFCGALGKLQKPQDISAGASIGKNTVKLLFTWLVFVCALIPIF* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1389 595 Pfam Multicopper oxidase 404 539 IPR011706 GO:0005507|GO:0016491
Ahy11g1389 595 Gene3D - 22 151 IPR008972 -
Ahy11g1389 595 Gene3D - 163 356 IPR008972 -
Ahy11g1389 595 Gene3D - 368 564 IPR008972 -
Ahy11g1389 595 Pfam Multicopper oxidase 39 152 IPR011707 GO:0005507
Ahy11g1389 595 SUPERFAMILY Cupredoxins 28 179 IPR008972 -
Ahy11g1389 595 PANTHER MULTI-COPPER OXIDASE 17 567 IPR045087 -
Ahy11g1389 595 SUPERFAMILY Cupredoxins 161 358 IPR008972 -
Ahy11g1389 595 PANTHER MONOCOPPER OXIDASE-LIKE PROTEIN SKS1 17 567 - -
Ahy11g1389 595 Pfam Multicopper oxidase 165 318 IPR001117 -
Ahy11g1389 595 SUPERFAMILY Cupredoxins 383 556 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1389 Ahy-Chr11 52977113 52982040 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1389 - - gmx:100788318 1014.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1389 11 52977113 52982040 Ahy11g1389 11 52977113 52982040 ECH
Ahy11g1389 11 52977113 52982040 Ahy1g1361 1 44017187 44021951 hybridization