Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1370 ATGGATTTTCCTAGATCTTCAAGTTCTCTTGCTCTCTTTGTCTCCATCAACTTGCTCTTCTTTGCACTAGCAAGTGGATGCTACACTTGTTCACACCCTACTCAACCTAAAAACCCTAACTCATTTTTCCCTTTCCCAAACCCTAACAATAATAAGGGATGTCCAAGAGATGCATTGAAGCTTGGAGTATGTGCCAAGATTCTTAATGGACCCATCGGTGCTGTGGTGGGTTCGCCGCCGGACCATCCATGTTGCTCAGTGCTAGATGGACTCATTGACCTCGAAGTGGCGGTTTGCCTTTGCACAGCGATCAAAGCTAACATTCTTGGAATTGACCTTAATATCCCAATTTCACTTAGCTTGCTCCTTAATGCTTGCGAGAAGACTCGACCCTCTGACTTCCAATGCTCCTAA 414 0.4517 MDFPRSSSSLALFVSINLLFFALASGCYTCSHPTQPKNPNSFFPFPNPNNNKGCPRDALKLGVCAKILNGPIGAVVGSPPDHPCCSVLDGLIDLEVAVCLCTAIKANILGIDLNIPISLSLLLNACEKTRPSDFQCS* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1370 137 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Ahy11g1370 137 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 6 136 - -
Ahy11g1370 137 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 56 136 IPR036312 -
Ahy11g1370 137 CDD HPS_like 54 136 IPR027923 -
Ahy11g1370 137 Gene3D - 53 137 IPR036312 -
Ahy11g1370 137 PANTHER - 6 136 - -
Ahy11g1370 137 Pfam Hydrophobic seed protein 54 137 IPR027923 -
Ahy11g1370 137 SMART aai_6 54 136 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1370 Ahy-Chr11 49268098 49268757 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1370 46 136 Acyl Lipid Metabolism Gene Families AT4G22490 38.298 4.30e-13 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1370 - - gmx:100527818 200.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1370 11 49268098 49268757 Ahy11g1370 11 49268098 49268757 ECH
Ahy11g1370 11 49268098 49268757 Ahy1g1341 1 40701175 40701920 hybridization