LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy11g1365	ATGGCTTCCAACAAAGCTAGTTCCTCCATTGCTCTTTTCGTCACACTCAATGTTCTCTTCTTTGCACTTGTCTCCGGATGTGGAAACAAATGCAATAGTCCCGGTTCCAATCCAAATCCTAACCCTAACCCTAACCCTAGTCCTTCAAGTGGCGGATCATGCTCACGTGATGCGCTCAAACTAGGCGTGTGCGCCAATGTGCTCAACGGTTTGTTGAATGTGACTTTGGGACAGCCACCAGTTACCCCTTGCTGCTCCCTCCTCGCCGGCCTCGTTGACCTTGAAGCCGCCGCGTGCCTCTGCACCGCTCTTAGGGCAAATGTTTTGGGCATCAATCTCAACCTTCCCATCTCACTTAGCTTGCTCCTTAATGTTTGCTCAAGGAAAGTGCCACATGGCTTCCAATGCAACTAA	414	0.5048	MASNKASSSIALFVTLNVLFFALVSGCGNKCNSPGSNPNPNPNPNPSPSSGGSCSRDALKLGVCANVLNGLLNVTLGQPPVTPCCSLLAGLVDLEAAACLCTALRANVLGINLNLPISLSLLLNVCSRKVPHGFQCN*	138

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy11g1365	137	Gene3D	-	53	137	IPR036312	-
	Ahy11g1365	137	CDD	HPS_like	56	136	IPR027923	-
	Ahy11g1365	137	PANTHER	14 KDA PROLINE-RICH PROTEIN DC2.15	8	136	-	-
	Ahy11g1365	137	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	27	-	-
	Ahy11g1365	137	SMART	aai_6	54	136	IPR016140	-
	Ahy11g1365	137	SUPERFAMILY	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	56	136	IPR036312	-
	Ahy11g1365	137	Pfam	Hydrophobic seed protein	54	136	IPR027923	-
	Ahy11g1365	137	MobiDBLite	consensus disorder prediction	34	54	-	-
	Ahy11g1365	137	PANTHER	-	8	136	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy11g1365	Ahy-Chr11	49036020	49036831	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy11g1365	45	136	Acyl Lipid Metabolism Gene Families	AT4G22490	43.158	8.41e-16	67.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy11g1365	-		-	gmx:100801985	169.088

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy11g1365	11	49036020	49036831	Ahy11g1365	11	49036020	49036831	ECH
	Ahy11g1365	11	49036020	49036831	Ahy1g1336	1	40280639	40281452	hybridization