Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1353 ATGGAAGCCCTGGCGGAGCTGGAACGAGTTCAAACCCAGCTCCTGAAACGCATATCGGAGTTAGAAAAACAAAACCAAAACCACTCCACTCCATCAACTGATTCTCCCATCGTTGACGAAGCTGACACCGTTACTCGTCTTTCCTCCATTTTGCGCTCTAACGCCGTTAACGACTTTTCCTTCAAGAGGGTCCCACCTGATTACTACGACTGGTCTCTTGAAGCTCGACGCGATGCCCTCGCTGCTCACTCCATCCAACATCTCTGCAAAAGCATCGTTTTGGTTAACACGCAAGCGCCCGCTAATGTCGTTGATTGTAGCGATCGCAAAAACTCCAAGTATTATGTTGTTGTGGTTCAGTACACAGCGCGGTTCAATGCCGAGGCTGTCAAGAATTTTCTGTATTCGCTCAACAATGGAAGCATAGCGAAGAAGAAATTCAACATGAGGCTGGCTCCTGAGCAGACATCAACAGACTTAACTGGATATGGGCACAATGCAGTGACTTGTATTGGCATGAAAACTGACATTCCGGTGATTTTGGATGAAGCTATCGTAAAACTGACCCCAGATTTCTTCTGGTTGGGTGGTGGTGAGGTTGATCTTAAGCTTGGAATAAGGACCTCTCAGTTAATCAGATTTGTCAACCCCTTCATTGTCAACTGTAGCGGCAGTTGA 678 0.469 MEALAELERVQTQLLKRISELEKQNQNHSTPSTDSPIVDEADTVTRLSSILRSNAVNDFSFKRVPPDYYDWSLEARRDALAAHSIQHLCKSIVLVNTQAPANVVDCSDRKNSKYYVVVVQYTARFNAEAVKNFLYSLNNGSIAKKKFNMRLAPEQTSTDLTGYGHNAVTCIGMKTDIPVILDEAIVKLTPDFFWLGGGEVDLKLGIRTSQLIRFVNPFIVNCSGS* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1353 225 CDD YbaK_like 72 220 - -
Ahy11g1353 225 PANTHER UNCHARACTERIZED 1 223 - -
Ahy11g1353 225 SUPERFAMILY YbaK/ProRS associated domain 60 222 IPR036754 GO:0002161
Ahy11g1353 225 Pfam Aminoacyl-tRNA editing domain 87 214 IPR007214 GO:0002161
Ahy11g1353 225 PANTHER YBAK/AMINOACYL-TRNA SYNTHETASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN 1 223 - -
Ahy11g1353 225 Coils Coil 4 24 - -
Ahy11g1353 225 Gene3D - 45 223 IPR036754 GO:0002161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1353 Ahy-Chr11 48341589 48344687 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1353 - - gmx:100815424 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1353 11 48341589 48344687 Ahy11g1353 11 48341589 48344687 ECH
Ahy11g1353 11 48341589 48344687 Ahy1g1326 1 39909113 39911658 hybridization