Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1352 ATGGCAAAGAGTTACTTCAAACAAGAACATGATCTTGAGAAGAGAAGAGCTGAGGCTGCTAGGATTAGGGAGAAATATCCGGATCGTATCCCGGTGATTGTGGAGAAGGCAGAAAGAAGTGATATCCCAAGTATTGACAAGAAAAAGTACCTTGTCCCTGCTGATCTGACAGTTGGACAATTTGTCTATGTAATCAGAAAGAGGATCAAATTAAGTGCAGAAAAGGCAATCTTTATATTTGTGGATAATGTCCTTCCACCTACAGGAGCAATAATGTCTGCCATATATGATGAGAAGAAGGATGAAGATGGGTTTCTTTATGTTACTTACAGTGGAGAGAACACCTTTGGGGACCTAACTTCCCACTAG 369 0.4065 MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYDEKKDEDGFLYVTYSGENTFGDLTSH* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1352 122 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 1 117 IPR004241 -
Ahy11g1352 122 CDD Ubl_ATG8 12 114 - -
Ahy11g1352 122 PANTHER AUTOPHAGY-RELATED PROTEIN 1 117 - -
Ahy11g1352 122 Pfam Autophagy protein Atg8 ubiquitin like 14 117 IPR004241 -
Ahy11g1352 122 Gene3D - 1 117 - -
Ahy11g1352 122 SUPERFAMILY Ubiquitin-like 3 117 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1352 Ahy-Chr11 48330133 48333245 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1352 K08341 - gmx:100499835 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1352 11 48330133 48333245 Ahy11g1352 11 48330133 48333245 ECH
Ahy11g1352 11 48330133 48333245 Ahy1g1325 1 39903803 39906958 hybridization