Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1222 ATGGATCAATTGTCAGCTATCAGTGAGGAACTCGCCGAGATCGATGGCCGCATAGCCGATAATTTCCGCTCTCTAGCGAATGGCTTCCAGAAGCTTGACAAGATTAAAGATTCCAGCAGACAGAGCAGGCAGCTCGAAGACCTCACTGACAAAATGCGCGACTCCAAACGTCTTATAAAAGAGTTCGATAAAGAGGTGAAAGCTTTGGAGGCTAATTTTGACAGAGAAACCACCAAAATGTTGAATGACAAGAAGCAGTCGATGATCAAAGAGCTCAATTCATATGTCGCTTTGAAAAAACAATATGCTTCAAATATTGAGAATAAGAAAATTGAGCTGTTTGAGGGAGCCAATGAAGGTTTTGCAGAAGAAAATGTCTTGTTAGCATCCTCAATGACAAATCAACAGCTAATGGATAATGGGAATCGGATGATGGATGAGACAGATCAAGCCATTGAGAGGGGAAAGAAGGTTGTTCAAGAAACAATAACTGTCGGTACAGAGACTGCAGCAGCTCTGAAGGCTCAGACAGAACAAATGAGCAGAATTGTCAATGAATTGGATTCTATCCATTTCTCTATAAAGAGAGCCTCGCAGTTGGTCAAGGAAATCGGTAGGCAGGTTGCTACTGACAAGTGTATTATGGGATTACTTTTCCTTATTGTAGCTGGAGTAGTTGCTATCATTATTGTAAAGCTTGTACACCCAAACAACAAGGACATCCGAGACATTCCCGGATTAGCTCCTCCAGCCATGAACAGAAGACTGCTTTGGAGTCAAAGTCACAGTTAA 792 0.4205 MDQLSAISEELAEIDGRIADNFRSLANGFQKLDKIKDSSRQSRQLEDLTDKMRDSKRLIKEFDKEVKALEANFDRETTKMLNDKKQSMIKELNSYVALKKQYASNIENKKIELFEGANEGFAEENVLLASSMTNQQLMDNGNRMMDETDQAIERGKKVVQETITVGTETAAALKAQTEQMSRIVNELDSIHFSIKRASQLVKEIGRQVATDKCIMGLLFLIVAGVVAIIIVKLVHPNNKDIRDIPGLAPPAMNRRLLWSQSHS* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1222 263 SUPERFAMILY SNARE fusion complex 132 205 - -
Ahy11g1222 263 SMART tSNARE_6 137 204 IPR000727 -
Ahy11g1222 263 CDD SNARE_SNAP25N_23N_29N_SEC9N 139 203 IPR044766 GO:0005484|GO:0031201
Ahy11g1222 263 Coils Coil 45 79 - -
Ahy11g1222 263 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 142 204 IPR000727 -
Ahy11g1222 263 Gene3D - 133 212 - -
Ahy11g1222 263 PANTHER NOVEL PLANT SNARE 11 1 250 - -
Ahy11g1222 263 Pfam Sec20 151 223 IPR005606 GO:0005484|GO:0006890
Ahy11g1222 263 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 1 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1222 Ahy-Chr11 39192976 39198411 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1222 K08494 - gmx:100786429 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1222 11 39192976 39198411 Ahy11g1222 11 39192976 39198411 ECH
Ahy11g1222 11 39192976 39198411 Ahy1g1212 1 32569979 32575508 hybridization