Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1201 ATGGCCGAATCGGTGGAGCTTCCGAGTCGCTTGGCGATCCTTCCTTTCAGGAACAAGGTCCTCTTACCCGGCGCCATCATCAGAATCCGATGTACTTCCCCTAGCAGTGTGAAGCTGGTGGAGCAAGAACTTTGGCAGCGAGAAGAGAAGGGATTGATTGGCATCTTGCCAGTGCGTGATGCTGCTGAAATTAAGCCCCTGGGCCCAGTTGTATCTCAAGGTACTGATTCTGTAGACCAAAGCGCAAAAGTCCTAGGTGGTTCATCTGATTCTCATAAGCTTGAAACAAAAAAACCGAATGATGTTGTTCATTGGCATTCCAGAGGGGTAGCTGCTCGAGCATTACATTTATCAAGGGGAGTGGAGAAACCAAGTGGGAGGGTCACATACATAGTTGTTCTTGAAGGCTTATGCAGATTTAGTGTCCAGGAACTTAGCACAAGAGGAACATACCATACTGCAAGGATATCGTCCCTTGAGATGACTAAGACTGAGATGGAACAAGTGGAGCAAGACCCAGATTTCATAATGTTGTCTCGCCAATTTAAAGCAACTGCCATGGAGCTTATTTCTGCTTTGGAACTGAAACAAAAAACTGGTGGAAGGACAAAAGTCCTTTTGGATACTGTTCCAGTTCACAAGTTGGCTGATATATTTGTTGCTAGCTTTGAGATCAGTTTTGAAGAACAGCTATCTATGTTGGATTCAGTTGACCCCAAAGTCAGGCTTTCAAAAGCAACCGAGTTAGTTGATAGGCACTTACAATCAATTCGTGTTGCGGAGAAAATTTCACAGAAGGTTGAAGGACAGTTGTCAAAATCCCAAAAAGAATTTCTTCTGCGCCAGCAGATGAGAGCTATCAAAGAGGAACTTGGTGATAATGATGATGATGAGGATGACCTGGTTGCCCTGGAACGAAAGATGCAGGGTGCCGGAATGCCTCAGAATATATGGAAGCATGCACACAGAGAGTTGAGGAGACTTAAAAAAATGCAGCCTCAGCAACCTGGGTATACCAGTTCACGGGTTTACCTAGAGCTTCTTGCTGATCTGCCGTGGCAGAGGGCCAGCGAAGAGCTTGAGCTAGACTTAAGAGCTGCCCGGAAGCGTTTGGACAGTGATCACTATGGTTTAGCAAAGGTCAAGCAGCGGATAATTGAATACCTAGCCGTTCGCAAGAGAGTAGCTGTTTGCAACCCAGTTATGTTGCTTGACGAAGTTGACAAAACAGGTTCTGATGTTCGTGGAGATCCAGCTTCAGCGTTGCTCGAAGTTCTTGATCCCGAACAAAATAAAACATTCAATGATCACTATTTGAATGTTCCATTTGATCTATCCAAGGTAATTTTTGTGGCAACAGCAAATAGGATGCAGCCTATTCCTCCACCACTTCTGGATAGAATGGAAGTTATTGAGCTTCCTGGATACACACCTGAGGAGAAGCTCCAAATTGCCATGCATCATTTGATTCCAAGAGTTTTAGACCAGCATGGATTGAGTTCTGAGTTTCTTCAGGTTCCAGAGGAAATGGTGAAACTTGTCATTCAAAGATATACCAGGGAAGCTGGTGTGCGAAACTTGGAAAGGAATCTGGCTGCCCTGGCACGTGCTGCTGCAGTAAAAGTTGCAGAGCAAGAACAGGTAGTTCCACTAAACAAAGGGATGCGGGGACTTGCTACACCACTTATGGAAAACAGACTTGCTGACAGCACTGAAGTTGAAATGGAGGTGATACCAATGGGTGTCAATAGTCGGGAAATATCAAACACGTTCAAGATTGCCTCTCCTCTCATTGTTGACGAAGCTATGCTTGAAAAAGTGCTTGGGCCTCCAAGATTTGATGATAGAGAAGCTGCAGATCGTGTTTCAACCCCTGGAGTCTCTGTTGGACTGGTTTGGACTTCTTTTGGTGGAGAAGTTCAATTCGTGGAGGCTACGGCAATGGCAGGGAAGGGTGAACTGCATCTCACTGGACAACTTGGTGATGTTATCAAAGAATCAGCTCAAATTGCATTGACATGGGTAAGGGCAAGGGCAACTGACTTTGGGCTGGCTACGGCAGACGGTATTAATCTTTTAGAGGGCCGAGATGTACACATTCATTTTCCGGCTGGTGCTGTACCTAAAGATGGTCCTTCAGCTGGTGTTACTTTGGTCACAGCGCTGGTATCACTCTTCAGTCAGAAGAGGGTAAGATCAGATACAGCTATGACTGGAGAAATGACATTGAGGGGGCTTGTACTCCCTGTTGGTGGCGTCAAGGATAAGGTGTTAGCAGCACATCGTCATGGTATTAAGAGAGTTATCCTACCTGAAAGGAACTTGAAGGACTTGGTTGAAGTACCATCATCAGTTCTGGCCAATATGGAGATACTGATTGCGAAGCGGATGGAAGATGTGTTAGAGAATGCTTTCGAAGGTGGGTGCCCTTGGAGACAACACTCAAAGTTATAG 2454 0.4556 MAESVELPSRLAILPFRNKVLLPGAIIRIRCTSPSSVKLVEQELWQREEKGLIGILPVRDAAEIKPLGPVVSQGTDSVDQSAKVLGGSSDSHKLETKKPNDVVHWHSRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYHTARISSLEMTKTEMEQVEQDPDFIMLSRQFKATAMELISALELKQKTGGRTKVLLDTVPVHKLADIFVASFEISFEEQLSMLDSVDPKVRLSKATELVDRHLQSIRVAEKISQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQGAGMPQNIWKHAHRELRRLKKMQPQQPGYTSSRVYLELLADLPWQRASEELELDLRAARKRLDSDHYGLAKVKQRIIEYLAVRKRVAVCNPVMLLDEVDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRMQPIPPPLLDRMEVIELPGYTPEEKLQIAMHHLIPRVLDQHGLSSEFLQVPEEMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQVVPLNKGMRGLATPLMENRLADSTEVEMEVIPMGVNSREISNTFKIASPLIVDEAMLEKVLGPPRFDDREAADRVSTPGVSVGLVWTSFGGEVQFVEATAMAGKGELHLTGQLGDVIKESAQIALTWVRARATDFGLATADGINLLEGRDVHIHFPAGAVPKDGPSAGVTLVTALVSLFSQKRVRSDTAMTGEMTLRGLVLPVGGVKDKVLAAHRHGIKRVILPERNLKDLVEVPSSVLANMEILIAKRMEDVLENAFEGGCPWRQHSKL* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1201 817 Coils Coil 524 544 - -
Ahy11g1201 817 Coils Coil 287 307 - -
Ahy11g1201 817 SUPERFAMILY PUA domain-like 10 251 IPR015947 -
Ahy11g1201 817 ProSiteProfiles Lon N-terminal domain profile. 11 252 IPR003111 -
Ahy11g1201 817 SUPERFAMILY Ribosomal protein S5 domain 2-like 625 804 IPR020568 -
Ahy11g1201 817 Pfam ATP-dependent protease La (LON) substrate-binding domain 11 252 IPR003111 -
Ahy11g1201 817 Gene3D - 303 351 - -
Ahy11g1201 817 Gene3D - 393 473 IPR027417 -
Ahy11g1201 817 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 364 545 IPR027417 -
Ahy11g1201 817 Gene3D - 1 160 IPR046336 -
Ahy11g1201 817 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 625 641 - -
Ahy11g1201 817 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 760 778 - -
Ahy11g1201 817 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 737 756 - -
Ahy11g1201 817 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 707 726 - -
Ahy11g1201 817 SMART lon_5 10 252 IPR003111 -
Ahy11g1201 817 PANTHER ATP DEPENDENT LON PROTEASE FAMILY MEMBER 1 393 IPR027065 GO:0004176|GO:0004252|GO:0005524|GO:0030163
Ahy11g1201 817 Pfam ATPase family associated with various cellular activities (AAA) 381 471 IPR003959 GO:0005524|GO:0016887
Ahy11g1201 817 ProSiteProfiles Lon proteolytic domain profile. 622 807 IPR008269 GO:0004176|GO:0004252|GO:0006508
Ahy11g1201 817 PANTHER ATP DEPENDENT LON PROTEASE FAMILY MEMBER 393 817 IPR027065 GO:0004176|GO:0004252|GO:0005524|GO:0030163
Ahy11g1201 817 PANTHER LON PROTEASE HOMOLOG 2, PEROXISOMAL 393 817 - -
Ahy11g1201 817 ProSitePatterns ATP-dependent serine proteases, lon family, serine active site. 710 718 IPR008268 GO:0004176|GO:0004252|GO:0006508
Ahy11g1201 817 PIRSF Lon_proteas 1 398 IPR004815 GO:0004176|GO:0005524|GO:0006508
Ahy11g1201 817 PIRSF Lon_proteas 393 555 IPR004815 GO:0004176|GO:0005524|GO:0006508
Ahy11g1201 817 PIRSF Lon_proteas 582 808 IPR004815 GO:0004176|GO:0005524|GO:0006508
Ahy11g1201 817 Pfam Lon protease (S16) C-terminal proteolytic domain 599 806 IPR008269 GO:0004176|GO:0004252|GO:0006508
Ahy11g1201 817 Hamap Lon protease homolog 2, peroxisomal [LONP2]. 3 817 IPR027501 GO:0004252|GO:0006515
Ahy11g1201 817 Gene3D - 624 810 IPR014721 -
Ahy11g1201 817 Gene3D - 474 613 - -
Ahy11g1201 817 Gene3D - 161 295 - -
Ahy11g1201 817 PANTHER LON PROTEASE HOMOLOG 2, PEROXISOMAL 1 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1201 Ahy-Chr11 37367979 37388497 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1201 K01338 - cpap:110812594 1001.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1201 11 37367979 37388497 Ahy11g1201 11 37367979 37388497 ECH
Ahy11g1201 11 37367979 37388497 Ahy1g1195 1 31502027 31521628 hybridization