Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1178 ATGGATTGCTTAGAACTCTACAAACAGAGGAATTTGAAAGAGGAAGGAGAAGAAGAAGAGGTGACACTTGATGGGAGTGTCGATTGGAATGGACGCCCTGCTATCAGATCCAAATCTGGAACATGGGTTGCTGGAACTATCATACTCTTGAATCAAGGTTTGGCAACTTTAGCATTCTTTGGGATTGGAGTGAACTTGGTTCTGTTCCTAACAAGGGTGATGGGGCAGAATAATGCTGATGCTGCTAATAGTGTGAGCAAGTGGACTGGCACTGTTTATATCTTCTCTCTTGTTGGGGCTTTTCTTAGTGATTCTTATTGGGGAAGATACAAAACTTGTGCCATCTTTCAGGTCATCTTTGTCATGGGTCTAATATCCTTATCACTATCATCGTACCTATTCTTGATTAGACCTAAAGATTGTGGGAATGAGACAGTTGTATGTGGGAAACATTCAAGCATGGAGATGGGGATGTTCTACCTCTCAATCTATCTCATTGCTCTAGGAAATGGAGGATACCAACCAAACATTGCAACATTTGGGGCTGATCAATTTGATGAAGAGCACTCAAAGGAAGGTTACTCAAAAGTGGCATTCTTTAGCTACTTCTACTTGGCTTTGAACCTTGGTTCCCTCTTCTCAAACACAATTCTGGGGTACTTTGAAGATGAAGGATTGTGGACACTTGGATTTTGGACATCTGCAGGGTCTGCCTTTGCTGCCCTGCTCTTGTTTCTCGTCGGCACGCCGAGATATCGACACTTTAAGCCTTGCGGCAACCCTCTTTCCAGGTTTTGCCAAGTCCTTGTGGCGGCGTCAAGGAAGTGTGGAGTTCAAATGACACCAAATGGAGATGACTTGTATGTCTTGGATGAAAAGGAATCTCCCAACAATGGCAATAGAAGGATTCTTCACACCCATGGATTCAAGTTTCTGGATAGGGCGGCATTTATTTCTTCAAGAGATCTAGAGGACAAAAAAGGAGGCATCAACAACCCTTGGCACCTTTGTCCTATAACTCAAGTTGAAGAAGTGAAGTGCATACTAAGGCTTCTTCCAATATGGCTCTGTACCATTATATACTCAGTGGTTTTCACACAAATGGCATCTCTCTTTGTGGAGCAAGGGGCTGCCATGAAAACAACAATCTCCGATTTCAAAATACCCCCAGCAAGCATGTCCAGTTTTGACATCCTTAGTGTAGCTGTCTTCATTTTCTTCTACCGTCGAGTGCTCGATCCGCTTGTCGGGAAACTGAAAAAGACAAGCTCCAAGGGACTTACAGAGCTTCAAAGAATGGGAGTTGGTCTTGTTATAGCCATAATGGCGATGGTTTCGGCCGGAATAGTCGAATGCTATAGGCTTAAGTATGCAAACCAAGGATGTCTCCATTGTAGTGGCTCAAGCTCTCTAAGCATCTTCTGGCAAATTCCTCAGTATGCCCTTATAGGAGCTTCTGAGGTTTTCATGTATGTAGGGCAACTAGAGTTCTTCAATGCTCAAACCCCAGATGGATTAAAGAGCTTTGGAAGCGCACTTTGCATGACATCAATCTCATTAGGGAACTATGTGAGTTGCTTACTAGTTAGCATGGTTATGAAGGTCTCAACTGAGGATCACATGCCAGGGTGGATCCCTGGAAACCTTAATAGAGGTCACTTAGATAGGTTTTTCTTTCTCCTCGCCGCATTAACATCCGTAGACTTGATCGCTTATATTGCCTGTGCCAAGTGGTTCAAAAGTATACAATTGGAAGGGAAGGATGAAGATGATGATCACCATACAAGTTGCAAAGTCTGA 1800 0.4344 MDCLELYKQRNLKEEGEEEEVTLDGSVDWNGRPAIRSKSGTWVAGTIILLNQGLATLAFFGIGVNLVLFLTRVMGQNNADAANSVSKWTGTVYIFSLVGAFLSDSYWGRYKTCAIFQVIFVMGLISLSLSSYLFLIRPKDCGNETVVCGKHSSMEMGMFYLSIYLIALGNGGYQPNIATFGADQFDEEHSKEGYSKVAFFSYFYLALNLGSLFSNTILGYFEDEGLWTLGFWTSAGSAFAALLLFLVGTPRYRHFKPCGNPLSRFCQVLVAASRKCGVQMTPNGDDLYVLDEKESPNNGNRRILHTHGFKFLDRAAFISSRDLEDKKGGINNPWHLCPITQVEEVKCILRLLPIWLCTIIYSVVFTQMASLFVEQGAAMKTTISDFKIPPASMSSFDILSVAVFIFFYRRVLDPLVGKLKKTSSKGLTELQRMGVGLVIAIMAMVSAGIVECYRLKYANQGCLHCSGSSSLSIFWQIPQYALIGASEVFMYVGQLEFFNAQTPDGLKSFGSALCMTSISLGNYVSCLLVSMVMKVSTEDHMPGWIPGNLNRGHLDRFFFLLAALTSVDLIAYIACAKWFKSIQLEGKDEDDDHHTSCKV* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1178 599 Gene3D MFS general substrate transporter like domains 13 588 IPR036259 -
Ahy11g1178 599 Pfam POT family 110 538 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ahy11g1178 599 CDD MFS_NPF7 42 578 - -
Ahy11g1178 599 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 17 588 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ahy11g1178 599 PANTHER PEPTIDE TRANSPORTER 17 588 - -
Ahy11g1178 599 SUPERFAMILY MFS general substrate transporter 32 590 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1178 Ahy-Chr11 35989588 35996379 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1178 1 598 Organic Solute Cotransporters AT1G32450 76.277 0.0 956
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1178 K14638 - gmx:100808276 1043.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1178 11 35989588 35996379 Ahy1g1173 1 30235002 30241719 hybridization
Ahy5g0476 5 5698900 5704093 Ahy11g1178 11 35989588 35996379 PCT
Ahy11g1178 11 35989588 35996379 Ahy5g0476 5 5698900 5704093 PCT