Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0658 ATGGATCTTGCCATTGTCCCATTTGATTCATTCCCCAAAGATCAACAAATGCTTTACCAAGAGTGGTTCAACTATGCAGATTCAGATGGTGATGGCCGCTTTACAGGGAGTGATGCCACCAAATTTTTTGCCATGTCTAACTTGTCACGACAAGATCTTAGGCAGGTTTGGGCTATTGCAGATACCAAGAGACAAGGATATCTGGATTTCCAAGAATTTGTTATTGCTATGCAGCTAATGTCAGCAGCCCAATCTGGGGAACCAATTACACATGACTTGATCTCTAGTGATTGTCATTATTTGAAAAACCTAAAACCTCCCAAAATGGAAGGTTTAGATAAATTGCTAGCAAAAAAAAGGAATAAACACAAAGAAAATGATACAATTAGTAATGTTCCTCCCTCTCCCTCTCCATCAATATCAAGTAAATGGTTTGCATCAAAGTCGTCACAAAAGATACCTGCTTCCGCCGTGACATCAATTATCGATGGTTTGAAGAAACTGTATATACAAAAGTTGAGGCCTTTAGAAGCCACTTACCGCTTTAATGATTTTGTTTCTCCTTTATTGACAAATAGTGACTTTGATGCCAAACCTATGGTTCTACTTTTGGGTCAATACTCAACTGGCAAAACAACATTTATCAAACATATGCTAAATACTAATTATCCAGGAGCTCACATTGGACCAGAACCTACAACAGATAGGTTTGTTGTTGTTATGGCTGGACCAGATGAAAGAAGCATTCCTGGGAATACAATTGCTGTTCAAGCAGACATGCCATTTAGTGGTCTATCAAGTTTTGGTTCAGCTTTTTTGTCAAAATTTGAGTGCTCTCAAATGCCTCATCCTCTACTAGAAGAAATTACATTTGTAGATAGCCCTGGAGTTCTATCCGGAGAAAAACAAAGAACACAAAGAGCATATGATTTTACTGGAGTAACATCATGGTTTGCTGCTAAATGTGATTTAATACTGCTTCTATTTGATCCTCATAAGCTTGATGTTAGTGATGAATTCAAGCGTGTCATATCATCCCTACGTGGTCATGATGACAAGACTCGAGTCGTTCTAAATAAGGCACACCAAGTTGATACTCAACAATTAATGAGGATTTATGGAGCATTAATGTGGTCACTTGGGAAGGTTCTAAATACTCCGGAGGTTATGCGTGTCTATATTGGCTCCTTCAATGACAAGCCAATAGATTATGCAGACAATGGTCCTCTTGGTGGTGAACTCTTTGAGAAGGAACAAGATGACCTTCTTTTAGATCTAAAAGATATACCAAGAAAAGCTTGTGATAGAAAAATCAACGAATTCGTGAAACGTGCTCGAGCTGCTAAGATACATGCTTACATTATTAGTCATCTTAAAAAGCAAATGCCTTCAATAATGGGCAAAACTAAAGCACAAGAAAAACTCATTGCAAATTTGGAAGGAGAATTCGCCAAGGTACAAAGGGAGTTCCATTTACCACCTGGTGACTTTCCAAATGTTGAGGAATTTAGAGAGAAACTGCGTGGCTACAACATCGACAAGTTTGAGAGATTGAGACCAAAATTGATAGACGCTGTGGATGACATGCTAGGTTATGATATTCCTAACCTCTTGAAGACTTTTAGAAACCCCTATGGTTAA 1641 0.3833 MDLAIVPFDSFPKDQQMLYQEWFNYADSDGDGRFTGSDATKFFAMSNLSRQDLRQVWAIADTKRQGYLDFQEFVIAMQLMSAAQSGEPITHDLISSDCHYLKNLKPPKMEGLDKLLAKKRNKHKENDTISNVPPSPSPSISSKWFASKSSQKIPASAVTSIIDGLKKLYIQKLRPLEATYRFNDFVSPLLTNSDFDAKPMVLLLGQYSTGKTTFIKHMLNTNYPGAHIGPEPTTDRFVVVMAGPDERSIPGNTIAVQADMPFSGLSSFGSAFLSKFECSQMPHPLLEEITFVDSPGVLSGEKQRTQRAYDFTGVTSWFAAKCDLILLLFDPHKLDVSDEFKRVISSLRGHDDKTRVVLNKAHQVDTQQLMRIYGALMWSLGKVLNTPEVMRVYIGSFNDKPIDYADNGPLGGELFEKEQDDLLLDLKDIPRKACDRKINEFVKRARAAKIHAYIISHLKKQMPSIMGKTKAQEKLIANLEGEFAKVQREFHLPPGDFPNVEEFREKLRGYNIDKFERLRPKLIDAVDDMLGYDIPNLLKTFRNPYG* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0658 546 PANTHER EH DOMAIN 19 544 - -
Ahy11g0658 546 MobiDBLite consensus disorder prediction 123 143 - -
Ahy11g0658 546 ProSiteProfiles EF-hand calcium-binding domain profile. 48 83 IPR002048 GO:0005509
Ahy11g0658 546 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 195 431 IPR030381 GO:0005525
Ahy11g0658 546 SUPERFAMILY EF-hand 10 89 IPR011992 -
Ahy11g0658 546 ProSiteProfiles EH domain profile. 15 93 IPR000261 GO:0005515
Ahy11g0658 546 Coils Coil 469 489 - -
Ahy11g0658 546 Pfam N-terminal EH-domain containing protein 164 196 IPR031692 -
Ahy11g0658 546 Pfam Domain of unknown function (DUF5600) 436 537 IPR040990 -
Ahy11g0658 546 MobiDBLite consensus disorder prediction 128 143 - -
Ahy11g0658 546 CDD EH 19 85 IPR000261 GO:0005515
Ahy11g0658 546 Gene3D - 201 429 IPR027417 -
Ahy11g0658 546 Gene3D - 12 110 - -
Ahy11g0658 546 Gene3D - 165 537 - -
Ahy11g0658 546 CDD EHD 200 444 - -
Ahy11g0658 546 SMART efh_1 18 46 IPR002048 GO:0005509
Ahy11g0658 546 SMART efh_1 52 80 IPR002048 GO:0005509
Ahy11g0658 546 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 468 IPR027417 -
Ahy11g0658 546 PANTHER CALCIUM-BINDING EF HAND PROTEIN 19 544 - -
Ahy11g0658 546 Pfam Cytoskeletal-regulatory complex EF hand 28 80 IPR000261 GO:0005515
Ahy11g0658 546 Pfam Dynamin family 201 361 IPR045063 -
Ahy11g0658 546 SMART eh_3 9 103 IPR000261 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0658 Ahy-Chr11 10869888 10876584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g0658 1 545 EF-hand Containing Proteins AT3G20290 76.330 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0658 K12483 - egr:104450264 857.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g0658 11 10869888 10876584 Ahy11g0658 11 10869888 10876584 ECH