Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0649 ATGAGCACGGTCCCAAAAGAAACGATCGAAGTGATAGCACAGAGCATTGGCATCACGAATCTGTCCCCTGATGTTGCCTTCGCTCTCGCCCCCGATCTCGAGTATCGAATTCGCGAAATCATGCAGGAGTCCATAAAATGCATGCGTCACTCAAAGAGAACTATTCTTACAGCAGATGATGTTGATAGTGCACTTGCATTGAGAAATTTAGAGCCAATATATGGTTTCACCTCTAACGACCCTTTGCGGTTCAAAAGAGCTGCTGGACACAAGGATTTGTTCTACATTGATGACAAAGATGTGGAATTTAAAGATCTGATTGAAGCACCGTTACCAAAAGCTCCGCTTGATACATCAATTACCAGTCATTGGCTGGCTATTGAAGGTGTACAACCTGCAATTCCTGAGAATGCTCCAGTTGAAGCTCCCACAGAAATAAGAAAATCGTCTGAGTATAAGGAAGATGGGATTCCAGTTGACATTAAATTACCTGTTAAACACGTAATAACAAAGGAGCTTCAGCTTTACTTTGACAAAATAACTGAGCTAGTTCTAAATAAGCCTGCTTCTATTCCCTTTAGAAGGGCACTAATTAGTTTGGCAACAGACATGGGACTCCATCCTTTGGTTCCTTATTTCTCACGCTTTGTAGCTGATGAGGTGGCACAAAACTTGCATAATTTAACACTTTTATTTGCCTTGATGCGTCTTGTCCGGAGCATTCTACAAAATCCTCACATACATATAGAGCTTTATTTACATCAATTGATGCCACCTATCATTACCTGTGTTGTTGCAAAAAGGATTGGAAACAGACTATCTGATAATCACTGGGAGCTTAGGAACTTCAGTGTTAATCTTGTTGCTTCAATATGCAAAAGATTTGGGAATGTTTATCATAATCTTCAGCCACGAGTGACAAAGACTTTTCTTCATGCATTTTTGGACCCAACTAAAGCTCTACCTCAGCACTATGGTGCAATTAAAGGAATAGCAGCTCTTGGATCAAGACTGGTTCGCTTGTTTATACTTCCAAACCTTGAGCCATATTTGCTTCTCCTCGAGCCGGAAATGCAACCAGAGAAACAGAGAAATGAAACAAAGAGGCAGGAAGCATGGCAAGTATATGGGGCCTTGTTGTGTGCTGTTGGACAATGTATGCATGAAAGGGCCAAAATCTTCAGCAATTTGCTCTCTCCTCCAACACGTGCTTCTTCTAGACCCAATGGAAAAGCCATGATTGCTATGTCAAGCAAACGTAAAGCCAGCACAGAAAACCTAATGCAGCAGCAGCAACCTCCATTGAAGAAACTTGCCACGGATGCCCCCGGGGGTGTGGTACCAATGAACTCCATGTCTGTTGACATGCAAATGCAAGGGTCAGCAGGTGCATTTTCGACCATGATGGGGGTTCCAAATGTTGGCGCGTCATCGATGGCTCGGCAGATATCTAATGACAACACAATGGGGAGAGAGGTTGGCGGTCAACAATCGAAGGTATCTTCCATTCTCGCTCAAGCCTGGAAGGATGACATCGATGCAGGACAATTACTGTCATCGGTGTATGAATTATTTGGTGAAAGTTTGTTATCCTTTATTCCAAAAGCTGAAGCAGGTGTATTTTTGTAA 1629 0.4266 MSTVPKETIEVIAQSIGITNLSPDVAFALAPDLEYRIREIMQESIKCMRHSKRTILTADDVDSALALRNLEPIYGFTSNDPLRFKRAAGHKDLFYIDDKDVEFKDLIEAPLPKAPLDTSITSHWLAIEGVQPAIPENAPVEAPTEIRKSSEYKEDGIPVDIKLPVKHVITKELQLYFDKITELVLNKPASIPFRRALISLATDMGLHPLVPYFSRFVADEVAQNLHNLTLLFALMRLVRSILQNPHIHIELYLHQLMPPIITCVVAKRIGNRLSDNHWELRNFSVNLVASICKRFGNVYHNLQPRVTKTFLHAFLDPTKALPQHYGAIKGIAALGSRLVRLFILPNLEPYLLLLEPEMQPEKQRNETKRQEAWQVYGALLCAVGQCMHERAKIFSNLLSPPTRASSRPNGKAMIAMSSKRKASTENLMQQQQPPLKKLATDAPGGVVPMNSMSVDMQMQGSAGAFSTMMGVPNVGASSMARQISNDNTMGREVGGQQSKVSSILAQAWKDDIDAGQLLSSVYELFGESLLSFIPKAEAGVFL* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0649 542 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6 1 542 - -
Ahy11g0649 542 SUPERFAMILY ARM repeat 195 387 IPR016024 -
Ahy11g0649 542 Pfam TATA box binding protein associated factor (TAF) 1 65 IPR004823 -
Ahy11g0649 542 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6 1 542 IPR037796 GO:0000124|GO:0005669|GO:0006367|GO:0016251|GO:0046695
Ahy11g0649 542 SUPERFAMILY Histone-fold 4 76 IPR009072 GO:0046982
Ahy11g0649 542 SMART TAF_cls 2 68 IPR004823 -
Ahy11g0649 542 CDD TAF6C 166 382 IPR011442 GO:0006367
Ahy11g0649 542 Gene3D Histone, subunit A 1 66 IPR009072 GO:0046982
Ahy11g0649 542 Gene3D - 165 370 IPR046344 GO:0006367
Ahy11g0649 542 Pfam TAF6 C-terminal HEAT repeat domain 260 347 IPR011442 GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0649 Ahy-Chr11 10687247 10698111 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0649 K03131 - gmx:100799998 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g0649 11 10687247 10698111 Ahy11g0649 11 10687247 10698111 ECH