Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0557 ATGAACAACGTTGGCGATCTCCACAAGGTTTGGGAAATCAACGCTCTGAAGAGGAAGCCGTTGCAAGAAGAAGCCACCAAGATGTTGGAGAAGATCGCGAAACAGGTCCAGCCCATTATGCGCAAGCACAAATGGAGGGTCAAGGTTCTCTCTGAATTCTGTCCAAACAATCCGCGACTTTTGGGGTTGAATGTTGGAGCTGGTATACATGTGAAGTTGCGATTGCGCAGACCGAACAGGGATTTGGACTTCTACCCATTTGATCAAGTTTTGGATACGATGCTTCATGAGCTTTGCCATAATGCCCATGGTCCTCATAATGCCAACTTCTACAAGCTTTGGGATGAACTTAGAAAGGAATGTGAAGAGCTGATGTCCAACGGAGTAACTGGCTCGGGAGAGGGGTTTGACCTTCCAGGAAGGCGCTTAGGTGGTCATTCCCGGCAGCCACCCCTTTCATCACTCCGTAAAACAGCACTTGCAGCTGCAGAAAAGAGATCGCGATTGGGATCACTCTTTCCCTCTGGACCTAACCGTCTTGGGGGTGATAGTGTTATAATGAAGGCACTTACTCCAGTGCAAGCGGCTGCAATGGCTGCAGAAAGGAGATTACAGGATGACATTTGGTGTGGTTCTCAAACCTGTGAAGCTTCAGATCATGAAGATTTTAACTTTGAACCTGCTGCGAATATTGAGCGCAAGGGTAAAAATGTGGGTAGCTCAAGACTTCGAGACAATTCTTCTCTACCTTTGGATCTGAAATCTCAGAAAAGGAGTCGTGTCATGGATTCAAGTTTACTGGATTGCTCGTCTAGTACCCCTAAATATGTTGATTTGACTACGGATGCACCACAGATTGGATCTATCATTGAACAATGCACTGTGACTCAAGGAAGGGGTGTTGGTGGATTAGAAAGCATTTCACATTCTGAGTCAAATTCTCGGATAGGATCTACTTCTGCAAATATTACAAGCTCCTCCACTCCACTTTCTGGTGATAATAATACATCTCATTCTGAAGAACTTGCAATGTGGGAGTGCTCAATGTGCACTCTGTTAAATAAAACATTAGCTCCATTATGTGAGTTGTGTGGCACACAACAGCCGAAAGATTTTGCCACCAAATACAGTACTTGGTCTTGTAAATTCTGTACGCTGGAAAACAGTGTGAAGTTGGACAAATGCTCAGCTTGTGATCAGTGGAGATACTCTCTTGGTGCACCAGTGTCATCCCGTGCACCTAACGTCGGCACTTGA 1257 0.4543 MNNVGDLHKVWEINALKRKPLQEEATKMLEKIAKQVQPIMRKHKWRVKVLSEFCPNNPRLLGLNVGAGIHVKLRLRRPNRDLDFYPFDQVLDTMLHELCHNAHGPHNANFYKLWDELRKECEELMSNGVTGSGEGFDLPGRRLGGHSRQPPLSSLRKTALAAAEKRSRLGSLFPSGPNRLGGDSVIMKALTPVQAAAMAAERRLQDDIWCGSQTCEASDHEDFNFEPAANIERKGKNVGSSRLRDNSSLPLDLKSQKRSRVMDSSLLDCSSSTPKYVDLTTDAPQIGSIIEQCTVTQGRGVGGLESISHSESNSRIGSTSANITSSSTPLSGDNNTSHSEELAMWECSMCTLLNKTLAPLCELCGTQQPKDFATKYSTWSCKFCTLENSVKLDKCSACDQWRYSLGAPVSSRAPNVGT* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0557 418 SUPERFAMILY Ran binding protein zinc finger-like 341 368 IPR036443 -
Ahy11g0557 418 Gene3D - 338 377 - -
Ahy11g0557 418 ProSiteProfiles Zinc finger RanBP2 type profile. 375 404 IPR001876 -
Ahy11g0557 418 Pfam WLM domain 9 205 IPR013536 -
Ahy11g0557 418 ProSiteProfiles Zinc finger RanBP2 type profile. 341 370 IPR001876 -
Ahy11g0557 418 ProSiteProfiles WLM domain profile. 1 205 IPR013536 -
Ahy11g0557 418 ProSitePatterns Zinc finger RanBP2-type signature. 379 398 IPR001876 -
Ahy11g0557 418 PANTHER ZINC ION BINDING PROTEIN 3 418 - -
Ahy11g0557 418 ProSitePatterns Zinc finger RanBP2-type signature. 345 364 IPR001876 -
Ahy11g0557 418 MobiDBLite consensus disorder prediction 235 256 - -
Ahy11g0557 418 PANTHER DNA-DEPENDENT METALLOPROTEASE WSS1 3 418 - -
Ahy11g0557 418 MobiDBLite consensus disorder prediction 304 335 - -
Ahy11g0557 418 SMART zf_4 377 401 IPR001876 -
Ahy11g0557 418 SMART zf_4 343 367 IPR001876 -
Ahy11g0557 418 MobiDBLite consensus disorder prediction 241 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0557 Ahy-Chr11 8591848 8602816 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0557 K22685 - gmx:100795976 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g0557 11 8591848 8602816 Ahy11g0557 11 8591848 8602816 ECH