Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0543 ATGCAGCCTCTCCGGCCGGCGAATCTTGCGGCCCTAGCGGCAGCGCTACTCCTCTTAGCCGCCGCCACAACCCATGCACACAACATTACCCGCATTTTGGAGAAGCACCCCGACTTCTCCACCTTTAACAAGTACCTAACACTAACTCACCTTGCGCCGGAGATCAACCGGCGAATCACCATAACCGTGTGCGCCATCGACAACACCGCCATGAACGAGCTGCTCTCGAAGCACCCTTCCATCTACACTCTGAAGAACATCCTGTCCCTCCACGTCCTCCTCGACTACTTCGGCGCCAAGAAGCTCCACCAGATCCCCAACGGCACCGCCCTCGCCGCCACCATGTTTCAGGCCACCGGAACCGCCCCCGGCTCCACGGGATTCGTCAACATCACCGACCTCCGCGGCGGAAAGGTGGGCTTCGGCGCCGAGAATAACGGCGGCGCCCTGTCCGCATTCTTCGTGAAATCGTTGGAGGAAATCCCTTACAACATATCGATAATACAGATCAGCAAGCCACTCCCCTCGGCTGCAGCAGAAGCCCCTACACCCGCACCCAGCAAGCAAAATCTCACTTCCATAATGTCCCGCCATGGCTGCAAGGTCTTCGCCGACACCCTTTCTGCCTCCCCCGACGCTATGTCCACCTTTTCTGACAATGTGGATGGCGGACTCACCGTCTTCTGCCCCATGGATGACGCCTTTAAGGCATTCCTACCAAAGTATAAGAACCTAACTGCAGCTGGGAAGGCGTCGTTGCTGGAGTACCATGCTACGCCTGTTTATGAGAGCATGGCTATGTTGAAGTCAAACAATGGTTTGATGAACACGCTTGCTACCGATGGAGCCAGCAAGTTCGACTTCACCGTGCAGAATGACGGTGATCAAGTCACGCTCAAGACCAAGATTGTTACTGCCAAGATCACTGGCACGCTCATTGACGAAGACCCGCTCGCGATCTACACCATTGATAAGGTTCTGCTTCCCAGGGAGCTTTTCAAGGCCCTGGCTCCGTCTCCTTCGCCCTCGCCCGCTCCGGAACCAGCCGCCGCCGACGCTCCTGCATCCCCGAAGAAAGGGGGAAAGAAGAAGAAGCAGAAGGCAGCCGACGCGCCGGCAGATGAGGAATCAGCGCCTGCGGATTCGCCCAGTGATGCCGCCGATGAGAGCGCTGACGACGGTAACGGCGCCGTTAGGTTTGACGGCGTCAGGTACGGTAACGTCATCTTCGTGGTTATGGCTTTGTGCTTTGGGTTTTCATTGCTGTAA 1269 0.5697 MQPLRPANLAALAAALLLLAAATTHAHNITRILEKHPDFSTFNKYLTLTHLAPEINRRITITVCAIDNTAMNELLSKHPSIYTLKNILSLHVLLDYFGAKKLHQIPNGTALAATMFQATGTAPGSTGFVNITDLRGGKVGFGAENNGGALSAFFVKSLEEIPYNISIIQISKPLPSAAAEAPTPAPSKQNLTSIMSRHGCKVFADTLSASPDAMSTFSDNVDGGLTVFCPMDDAFKAFLPKYKNLTAAGKASLLEYHATPVYESMAMLKSNNGLMNTLATDGASKFDFTVQNDGDQVTLKTKIVTAKITGTLIDEDPLAIYTIDKVLLPRELFKALAPSPSPSPAPEPAAADAPASPKKGGKKKKQKAADAPADEESAPADSPSDAADESADDGNGAVRFDGVRYGNVIFVVMALCFGFSLL* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0543 422 MobiDBLite consensus disorder prediction 337 396 - -
Ahy11g0543 422 Gene3D FAS1 domain 24 166 IPR036378 -
Ahy11g0543 422 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 10 407 IPR033254 -
Ahy11g0543 422 SUPERFAMILY FAS1 domain 184 330 IPR036378 -
Ahy11g0543 422 SMART fasc_3 62 177 IPR000782 -
Ahy11g0543 422 SMART fasc_3 226 330 IPR000782 -
Ahy11g0543 422 ProSiteProfiles FAS1/BIgH3 domain profile. 187 327 IPR000782 -
Ahy11g0543 422 Gene3D FAS1 domain 168 330 IPR036378 -
Ahy11g0543 422 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 10 407 - -
Ahy11g0543 422 ProSiteProfiles FAS1/BIgH3 domain profile. 26 174 IPR000782 -
Ahy11g0543 422 Pfam Fasciclin domain 200 329 IPR000782 -
Ahy11g0543 422 Pfam Fasciclin domain 37 105 IPR000782 -
Ahy11g0543 422 SUPERFAMILY FAS1 domain 32 174 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0543 Ahy-Chr11 8346968 8348804 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0543 - - lang:109350304 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g0543 11 8346968 8348804 Ahy11g0543 11 8346968 8348804 ECH