Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g0523 ATGGGTATTTGCAACCAGGATGCAATCAAGCAGTTGCAATCCATGATGGAAAATGTGAATGAGCAGCAGAAGATCACATTCCAGAACATGCATCAGGGATATCCAACTGAAACACTAGCCAGATTTCTCAAAGCAAGGGACTGGAATGTTGCCAAAGCCCATAAAATGATAATCGATTGTTTACAATGGAGAGTTGAAAATGAGATTGACAATGTTTTATCAAAGCCAATCCCCGTAGATGTGTACAAAGCCGTGCGAGATTCTCAACTCATTGGAATGTCTGGTTACTCAAAGGAGGGCCTTCCTGTCATCGCTGTTGGTGTTGGGCTCAGCACATTTGACAAAGCATCCGACAAATACTATGTGCAATCGCACATCCAAATGAACGAATATAGGGATCGGGTGGTCTTGCCAACAGCTTCGAAGAAGCAAGGACGTTACATTGGCACTTGTGTGAAAGTCTTGGATATGACTGGTTTGAAAATTTCAGCGCTGAACCAACTGAGGCTTTTGACTGCTATATCTACAATTGACGACTTGAACTACCCGGAAAAGACAGACACATATTATATTGTTAACGTGCCGTATGTATTCTCGGCGTGTTGGAAGGTTGTAAAGCCCCTTTTGCAAGAAAGAACGAGGAAGAAAGTTCAGGTGCTGCAAGGATGTGGGAAGGAGGAATTACTCAAGGTAATGGACTATCAGTCTCTCCCACACTTCTGCAGAAAAGAAGGTTCCGGATCCTCGAAACACCGCGTAGCAGGAGACACTGAAAATTGCTTCTCCTTCGACAGCAACTTCCACCAACATCTCTACAACTTCATCAAGCAGCAAGCCGTCGTCATGCAAACCATATCACCAATCAGACAGGGATCCTTCTATGTTGACTTACCCGAGCCAGACCCCGACGACGCCAAGATTGCCAAGACCATCGAATCCGAGCTCCACAAGTTGGAAATTCAGAATGGTTCAATGAATGGTGTTGCGGTTAATGGACACTAA 1002 0.4471 MGICNQDAIKQLQSMMENVNEQQKITFQNMHQGYPTETLARFLKARDWNVAKAHKMIIDCLQWRVENEIDNVLSKPIPVDVYKAVRDSQLIGMSGYSKEGLPVIAVGVGLSTFDKASDKYYVQSHIQMNEYRDRVVLPTASKKQGRYIGTCVKVLDMTGLKISALNQLRLLTAISTIDDLNYPEKTDTYYIVNVPYVFSACWKVVKPLLQERTRKKVQVLQGCGKEELLKVMDYQSLPHFCRKEGSGSSKHRVAGDTENCFSFDSNFHQHLYNFIKQQAVVMQTISPIRQGSFYVDLPEPDPDDAKIAKTIESELHKLEIQNGSMNGVAVNGH* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g0523 333 Pfam CRAL/TRIO domain 89 240 IPR001251 -
Ahy11g0523 333 PANTHER - 1 329 - -
Ahy11g0523 333 SUPERFAMILY CRAL/TRIO N-terminal domain 9 74 IPR036273 -
Ahy11g0523 333 CDD SEC14 82 240 IPR001251 -
Ahy11g0523 333 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 78 238 IPR001251 -
Ahy11g0523 333 Coils Coil 5 25 - -
Ahy11g0523 333 SMART CRAL_TRIO_N_2 35 60 IPR011074 -
Ahy11g0523 333 Pfam CRAL/TRIO, N-terminal domain 8 59 IPR011074 -
Ahy11g0523 333 SMART sec14_4 78 246 IPR001251 -
Ahy11g0523 333 Gene3D - 4 260 IPR036865 -
Ahy11g0523 333 PANTHER OS09G0258000 PROTEIN 1 329 - -
Ahy11g0523 333 SUPERFAMILY CRAL/TRIO domain 81 240 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g0523 Ahy-Chr11 7753917 7758156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g0523 29 318 Acyl Lipid Metabolism Gene Families AT1G55840 70.447 3.03e-164 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g0523 - - gmx:100817955 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g0523 11 7753917 7758156 Ahy11g0523 11 7753917 7758156 ECH