LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy11g0489	ATGGGGATGTTATCTGCCGCGAACGCTGTGGCAGCTGCGCTGAATCGCGTGGCGAGCAGTAAGGTGCCGAGAGGGAGGCGCCTGGCGGGGGACCATGTGGTGTATGACGTGGATGTGAGGCTTCCCGGGGAGGTGCAGCCGCAGCTTGAGGTGGCGCCAATAACGAAATATGGTTCGGATCCTAACTTGGTTCTTGGAAGGCAAATAGCTGTTAACAAGTCTTACATTTGCTATGGGTTGAAGCAAGGGAACATTAGAGTGCTTAATATTCACACAGCTGTTAGGTCCCTTCTCAAAGGCCACAATCAGAGGGTCACAGACTTGGCTTTCTTTGCTGAAGATGTTCATCTCCTGGCTAGTGTTGGAACAGATGGCCGTGTCTTTGTATGGAAGATCTCTGAAGGTCCTGATGATGAAGATAAGCCTCAAATTACTGCCAATATTGTTATCGCTATCCAAATGGTGGGAGAGGAGAAAGTTGAAAATCCTCGAATCTGCTGGCACTGCCACAACCAAGAAATTTTGATAATTGGTATGGGAAGACATGTTCTAAGAATTGACACCACAAAAGTTGGAAATGGTGAGGCCTTTGTGACAGAGGACACTCTGAGGTGTCCTCTTGACAAGCTCATGGATGGTGTTCAGCTGGTGGGGACTCATGATGGAGAGGTGACTGATTTGTCAATGTGCCAATGGATGAGAAATCGTTTGGTATCTGCATCACATGATGGCACGATAAAGATCTGGGAAGATCGCAAGACACAGCCACTTGCGGTGATGAGACCACATGATGGGCATCCTGTTTTTTCTGCTACATTTTTCACTGCTCCCCACCGACCTGATCATATTGTTCTTATAACTGGTGGACCTCAAAATCGGGAAGTTAAGCTTTGGGTCTCAGCAAGTGAAGAAGGTTGGCTACTTCCAAGTGATGCTGAATCATGGAAATGCACGCAGACATTGGAGTTGAGGAGTTCAGCTCAACCATCTGTTAAGGACTCATTCTTTAACCAGGTTGCAGCATTGTCTCATGCAGGTCTGCTTTTACTTGCAAATGCTCAGAGGAATGCTATATATGCTGTACACTTAGAATATGGTTCTAATCCTGAATCAACACGCATGGATTATATAGCTGAGTTTACTGTGACCATGCCCATTCTGAGTTTTACTGGGACAAGTGATATATTACCTCATGGTGAACATATTGTTCAGGTTTATTGTGTTCAAACACAGGCCATTCAGCAGTATGCTTTGGATTTAGCCCAATGCCTGCCATCACCATTTGAAAATGTGGGACTAGAGAAGCCAGATTCCTCTGTTTCCCGTGATGCTGATGGATTCAGTACTGTGGACTCATCTGGTGTTAGAGCATCTGAAATGTCGTCAGCCAGTTCTGCTCCCAAAACAATGTCACAAGCTGGTGGCACTGAGAGTGCACTTGCTGGAAGATACCCTTTAAGCTCTGGCTATATTGGGGGACCTACTTCGGCTCCATCCAGTAGTGATGCTGATATTGTTTGTGTTCCATCTCCGCCTCTTCCTTTGAGCCCAAGGTTGTCTAGGAAACTGTCTGATTTCAGGAGTTCACAATCTAATTTGGGTGACCATGTTGGGGACCAATCCATTAATGATTATTCAGTTGACAGACAAATGCCTACTATTCATAGGAACTTGTCTGATGCACCACTTATGAATAATGATTTGAAGAATGATGAGAAAGTCAAACAGGATGATATTTCGAGCGTACTTAATCCCTCTGTTATGTTTAAGCAACCAACTCACCTGGTTACTCCTTCTGAAATCATTAAGGCCGGTTCTCCCCCTGAGACAAATATAATTGATAGAAATAGTGAAGGAGATACAAAGATCCCAGATGTGGTTGATTTGGGTAATGCTGAAGTAGAAGTGAAAGTGGTCGGTGAGGCTCCACCTGATCAAAGCGATGAGTATAATCATCAGGGATCACAACAAAACCTAGTTTCTGATGCTAAAGAAAAATACTTTTGCTCTCAGGCTTCAGATCTCGGTATTGAGATGACGCGAGAATGCTGTGCAATATCAGGGGGAACTTATATTACAGGGGAACCAGGGCAAGTTGATCTTAGTTTAGGGGAATCACTTTCCCAAACTTCTAATGCTGGTGAGGATGGACTGCAAGACTCAACAAAAGATGTGCACGAAAAGATTTCTGACTCATCTGCATCCATGACAGTACCACCTTCACCTGCACCTAACACAAAAGGGAAGAGACAGAAGGGAAAAAATTCTCAAGCATCTGGTCCATCTTCCCCATCTCCAAGTGCATGCAATTCAGTTGATTTGTCAAATGAACTAGGTGGAAGTTCAAACCTCCCATCTGCTGAAAATGCATTTCATCAAATTCTAGCAATGCAAGAATCAATTAATCAGTTATTGACTATGCAAAAAGAGATGCAGAAGCAAATGACAATGATGGTTACAGTTCCAGTTACAAAAGAAGGTAGAAGGCTTGAGGCAGCCCTGGGGAGAACTGTAGAAAATGCTGTCAAGGCCAATACGGATGCTTTGTGGGCTCGAATTCAAATGGAGAATGTAAAAAATGAAAAGTTGCTACGAGATCGTATTCAGCATGTTACAGGTTTGATTAGTAACTTCATGAATAAGGATCTACCAGCAATATTGGAGAAAATACTAAAGAAGGAAATAGCTTCAGTGGGTCCAGCTGCAGTCCGTGCAATGACCCCCACTATTGAGAAAATAATATCTTCAGCCATTGTAGAGTCTTTCCAGAGAGGAGTAGGTGATAAGGCAGTAAATCAACTTGATAAATCAGTCAATGCAAAACTTGAAGCCACTGTTGCCAGGCAAATTCAAGCACAGTTTCAGACGACTGGAAAACAAGTGCTTCAGGATGCACTCAAATCCAGTTTTGAAATATCAGTGGTTCCCGCATTTGAGAAATCATGCAAAGCAATGTTTGACCAAGTTGATTCTACATTTCAAAAGGGCATGGTTGAACATTCAACTGCAGTGCAACAACGCCTTGAATCTGGGCATACTTCACTGGCAATGACTCTAAGGGAATCCATTAATTCAGCTTCATCAGTTACTCAAACTTTGAGTAGAGAAGTGCTAGAGGGACAGAGAAAGCTAATGGCATATGCAACTGCAGGAGCTAACTCTGGCACACTAAATCCTTTGCCCATTCAGCTGAACAATGGACCTCTGCTTCGTGAAAAGGTTGAAGTGCCTCTCGATCCCAAACAAGAGCTAGCAAGGTTGATAGCTGAACGGAAGTTTGAGGAAGCTTTCACCGGGGCTCTACAAAGAAGTGATGTGTCGATTGTATCTTGGTTATGTTCTCAGGTTGATTTACATGGACTTTTGTCAATGGTTCCTCTTCCTTTGACCCAAGGAGTAGTGCTTTCACTTCTGCAGCAACTGGCATGTGATATTAACAATGATACCTCACGAAAGATTGCATGGATGATGGATGTGGCTGCCGCCATTAATCCCTCAGACCCCATGATTGCGATGCATGTGCGACCCATATTTGAAGTTTATCAGATACTGAATCATCAACGTAGCTTGCCTACAATGACTGGACCTGATCTTTCAAGCATCCTTCTTTTATTGCATGTCATCAACTCTATGCTCATGACATGTAAATGA	3651	0.4363	MGMLSAANAVAAALNRVASSKVPRGRRLAGDHVVYDVDVRLPGEVQPQLEVAPITKYGSDPNLVLGRQIAVNKSYICYGLKQGNIRVLNIHTAVRSLLKGHNQRVTDLAFFAEDVHLLASVGTDGRVFVWKISEGPDDEDKPQITANIVIAIQMVGEEKVENPRICWHCHNQEILIIGMGRHVLRIDTTKVGNGEAFVTEDTLRCPLDKLMDGVQLVGTHDGEVTDLSMCQWMRNRLVSASHDGTIKIWEDRKTQPLAVMRPHDGHPVFSATFFTAPHRPDHIVLITGGPQNREVKLWVSASEEGWLLPSDAESWKCTQTLELRSSAQPSVKDSFFNQVAALSHAGLLLLANAQRNAIYAVHLEYGSNPESTRMDYIAEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTQAIQQYALDLAQCLPSPFENVGLEKPDSSVSRDADGFSTVDSSGVRASEMSSASSAPKTMSQAGGTESALAGRYPLSSGYIGGPTSAPSSSDADIVCVPSPPLPLSPRLSRKLSDFRSSQSNLGDHVGDQSINDYSVDRQMPTIHRNLSDAPLMNNDLKNDEKVKQDDISSVLNPSVMFKQPTHLVTPSEIIKAGSPPETNIIDRNSEGDTKIPDVVDLGNAEVEVKVVGEAPPDQSDEYNHQGSQQNLVSDAKEKYFCSQASDLGIEMTRECCAISGGTYITGEPGQVDLSLGESLSQTSNAGEDGLQDSTKDVHEKISDSSASMTVPPSPAPNTKGKRQKGKNSQASGPSSPSPSACNSVDLSNELGGSSNLPSAENAFHQILAMQESINQLLTMQKEMQKQMTMMVTVPVTKEGRRLEAALGRTVENAVKANTDALWARIQMENVKNEKLLRDRIQHVTGLISNFMNKDLPAILEKILKKEIASVGPAAVRAMTPTIEKIISSAIVESFQRGVGDKAVNQLDKSVNAKLEATVARQIQAQFQTTGKQVLQDALKSSFEISVVPAFEKSCKAMFDQVDSTFQKGMVEHSTAVQQRLESGHTSLAMTLRESINSASSVTQTLSREVLEGQRKLMAYATAGANSGTLNPLPIQLNNGPLLREKVEVPLDPKQELARLIAERKFEEAFTGALQRSDVSIVSWLCSQVDLHGLLSMVPLPLTQGVVLSLLQQLACDINNDTSRKIAWMMDVAAAINPSDPMIAMHVRPIFEVYQILNHQRSLPTMTGPDLSSILLLLHVINSMLMTCK*	1217

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy11g0489	1216	Pfam	WD40 region of Ge1, enhancer of mRNA-decapping protein	50	168	IPR032401	-
	Ahy11g0489	1216	Pfam	WD40 region of Ge1, enhancer of mRNA-decapping protein	237	364	IPR032401	-
	Ahy11g0489	1216	Gene3D	-	157	413	IPR015943	GO:0005515
	Ahy11g0489	1216	Gene3D	-	1129	1215	IPR044938	-
	Ahy11g0489	1216	SMART	WD40_4	91	131	IPR001680	GO:0005515
	Ahy11g0489	1216	SMART	WD40_4	213	250	IPR001680	GO:0005515
	Ahy11g0489	1216	MobiDBLite	consensus disorder prediction	522	543	-	-
	Ahy11g0489	1216	Gene3D	-	67	150	IPR015943	GO:0005515
	Ahy11g0489	1216	ProSiteProfiles	Trp-Asp (WD) repeats profile.	217	259	IPR001680	GO:0005515
	Ahy11g0489	1216	PANTHER	ENHANCER OF MRNA-DECAPPING-LIKE PROTEIN	11	1216	-	-
	Ahy11g0489	1216	MobiDBLite	consensus disorder prediction	442	476	-	-
	Ahy11g0489	1216	MobiDBLite	consensus disorder prediction	731	784	-	-
	Ahy11g0489	1216	ProSiteProfiles	Trp-Asp (WD) repeats circular profile.	98	135	-	-
	Ahy11g0489	1216	MobiDBLite	consensus disorder prediction	517	543	-	-
	Ahy11g0489	1216	SUPERFAMILY	WD40 repeat-like	68	326	IPR036322	GO:0005515
	Ahy11g0489	1216	MobiDBLite	consensus disorder prediction	434	476	-	-
	Ahy11g0489	1216	PANTHER	ENHANCER OF MRNA-DECAPPING PROTEIN 4	11	1216	IPR045152	GO:0031087
	Ahy11g0489	1216	MobiDBLite	consensus disorder prediction	708	784	-	-
	Ahy11g0489	1216	ProSiteProfiles	Trp-Asp (WD) repeats profile.	98	140	IPR001680	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy11g0489	Ahy-Chr11	6977295	6987525	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy11g0489	K12616		-	gmx:100798228	1914.81

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy11g0489	11	6977295	6987525	Ahy11g0489	11	6977295	6987525	ECH