Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2147 ATGGCAAGGCCTCATGTTCTTGTTGTACCTTACCCTGAACAAGGGCATGTGATTCCACTAATGGAACTTTCCTTGTGCTTAGTAAAACAAGGCATCAAAGTAACATTTGTTAACACTAAACATAACCATGAGAGGATCATGAATGCATTCCCCAAAGGGAATAATAATGCTTTGCTATCTCAAATGAATCTTGTGTGGATACCTGATGGATTGGGATCCTCAGAAGAGAGGAAGATGCCGGGGAAGTCGTCCGAAGCAGTGCTGAAGGTTATGCCGGAGAAAGTTGAGCAGATCATTGAAGACATCAATGATGGATCACTTTGTGAAGAAAAGATTAGTTGTGTGCTTGCTGATCAGAGCATTGGCTGGGCTATTGGCATTGCCGTAAAGAAGGGGATTCGACCGGCGGCATTCTGTCCTGCCGCCGCCGCGCAGTTGGTGTTGGGATTGAGCATCCCAAAGTTGATTGAGAGTGGCTTCGTCGACCAAGATGGAACTCCACTGGAAAATCAAATCATTCAGCTATCACCAACAATGCCAGTTGTAAGCACAGAAAACCTCGTCTGGGTTCGCGCAGGGAGCACAGCTGCTCGGAAGCATATTTTCCAGCTCATGTTGAAAAACATTGAGTTTATGGAGAAAACTGAATGGATTCTTTGCAATTCAACTTATGATCTTGAGTCTGCAGCATTTTCTCTGGCACCAAAAATCACACCAATAGGGCCAATTCTGTCATCAAGCCATAATGAGCTTGACCACTCTGCAGGTCATTTCTGGCCACAACACCAGAATTGTTTGAAATGGTTGGATCAACAATCACCCTGTTCAGTTATATATGTCGCATTCGGAAGCATCACAACTTTTAGTTCACTACAATTCCAAGAACTCTGTTTGGGACTCGAAACGTCAAATAGGCCTTTCCTGTGGGTTCTGCAACCGGATATCAAAGGAGGGATGCAAAATCTGTATCCAGAAGGGTTTGAAGAAAGGGTAAGTAATCGTGCTAGGATGGTGGGTTGGGCGCCACAGCAGAAAATTCTAAGTCATTCTTCGGTTGCTTGCTTCATAAGTCACTGTGGTTGGAACTCTACAATGGAAAGTGTAAGCAATGGAGTCCCAATCTTATGTTGGCCTCACTTTGCTGATCAGTTCTTGAATAGGAGCTATGTTTGTGATGTTTGGAAGGTAGGAATTGCACTCGAACGAGACAAAAGTGACATAGTCACAAAAGGGGAAATCAGAGACAAAATTGAGCAGCTTTTGAGTGATGAACATTTGAAAGCAAGAGCTGCAAGTATCAAGGAGAAGGTTCAACTTGCCACTGAACAAGGTGGCTTGTCTAACAGTAATCTAGATAGATTTATCAAGTGGATCAAAACATGA 1383 0.436 MARPHVLVVPYPEQGHVIPLMELSLCLVKQGIKVTFVNTKHNHERIMNAFPKGNNNALLSQMNLVWIPDGLGSSEERKMPGKSSEAVLKVMPEKVEQIIEDINDGSLCEEKISCVLADQSIGWAIGIAVKKGIRPAAFCPAAAAQLVLGLSIPKLIESGFVDQDGTPLENQIIQLSPTMPVVSTENLVWVRAGSTAARKHIFQLMLKNIEFMEKTEWILCNSTYDLESAAFSLAPKITPIGPILSSSHNELDHSAGHFWPQHQNCLKWLDQQSPCSVIYVAFGSITTFSSLQFQELCLGLETSNRPFLWVLQPDIKGGMQNLYPEGFEERVSNRARMVGWAPQQKILSHSSVACFISHCGWNSTMESVSNGVPILCWPHFADQFLNRSYVCDVWKVGIALERDKSDIVTKGEIRDKIEQLLSDEHLKARAASIKEKVQLATEQGGLSNSNLDRFIKWIKT* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2147 460 CDD GT1_Gtf-like 4 440 IPR002213 GO:0008194
Ahy10g2147 460 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 3 459 - -
Ahy10g2147 460 PANTHER EG:EG0003.4 PROTEIN-RELATED 3 460 - -
Ahy10g2147 460 ProSitePatterns UDP-glycosyltransferases signature. 340 383 IPR035595 -
Ahy10g2147 460 Gene3D Glycogen Phosphorylase B; 8 451 - -
Ahy10g2147 460 PANTHER UDP-GLYCOSYLTRANSFERASE 83A1 3 460 - -
Ahy10g2147 460 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 271 428 IPR002213 GO:0008194
Ahy10g2147 460 Gene3D Glycogen Phosphorylase B; 253 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2147 Ahy-Chr10 109831052 109833366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2147 1 460 Glycosyltransferase AT3G02100 50.000 1.32e-164 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2147 - - adu:107471118 933.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2639 20 135761543 135764231 Ahy10g2147 10 109831052 109833366 hybridization
Ahy10g2147 10 109831052 109833366 Ahy14g2961 14 138334257 138336538 PCT
Ahy10g2147 10 109831052 109833366 Ahy4g2612 4 124061483 124063561 PCT