Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1759 ATGGATTCCGTTGCTTCTAATTCTGATAATAATAATAATAATAATTCTTCTTCGTCATCATCGTCGTCTTCGTCGCAGCAGAATCATCACCACCACCACCCCCGGTTCAAGCCGAGCCAACCAATCTCGGACCGGATAGTCCGTGCCCTGAGGCACCGCCTCCTCCTCCTCCACCGCTCCACCACCACCTTCTTCGTCTTGGGCGCCACCGCGAACGTCTACACGGTGAACCTCTCGTCCACACCATCATGCACGTGCCCGGACCGAACCACCCCATGCAAGCACATCCTCTTCGTCCTCATCCGTGTCCTGGGCGTGCCCCTCGACGACGCCTGCCTAAGGCGGAGGACCCTCCGACCCTGCCAGGTCCAGCGCCTGATGGCGGCACCCACGCTCCCCGAGGCAGTGGCGGGAGACGCGCTGAAGCAGAGGTTCCGGCAGGTGTTCTTGGAGGGAGGAGGATCGTCGTTATCGTCGTCGTCGATCGAGACGGAGGAGGGTGCCACGTGTCCCGTGTGCATGGAAGAGATGGGGAAGGAAGAGAAGCTTGTGGCATGTGGGACATGCAGGAACCCTATCCATGAAGAGTGCCTTATGAGGTGGAAGAGGAGCAATGGGAGGAGATCGGCGAGTTGCGTGATATGCAGGGCACGGTGGCGGAATAGGGCGGAACAGGATAAGTATGTTAACCTCTCCGCGTATGTTAGCGAGGATGATGATGTCATGCCACCCCCTTCTTCGTCTCTCTGCACTGATCATCCCTAG 765 0.5817 MDSVASNSDNNNNNNSSSSSSSSSSQQNHHHHHPRFKPSQPISDRIVRALRHRLLLLHRSTTTFFVLGATANVYTVNLSSTPSCTCPDRTTPCKHILFVLIRVLGVPLDDACLRRRTLRPCQVQRLMAAPTLPEAVAGDALKQRFRQVFLEGGGSSLSSSSIETEEGATCPVCMEEMGKEEKLVACGTCRNPIHEECLMRWKRSNGRRSASCVICRARWRNRAEQDKYVNLSAYVSEDDDVMPPPSSSLCTDHP* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1759 254 Pfam Ring finger domain 169 216 IPR001841 -
Ahy10g1759 254 ProSiteProfiles Zinc finger SWIM-type profile. 74 104 IPR007527 GO:0008270
Ahy10g1759 254 Pfam SWIM zinc finger 74 102 IPR007527 GO:0008270
Ahy10g1759 254 SUPERFAMILY RING/U-box 161 222 - -
Ahy10g1759 254 MobiDBLite consensus disorder prediction 1 42 - -
Ahy10g1759 254 PANTHER - 18 242 - -
Ahy10g1759 254 MobiDBLite consensus disorder prediction 1 27 - -
Ahy10g1759 254 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 155 233 IPR013083 -
Ahy10g1759 254 ProSiteProfiles Zinc finger RING-type profile. 170 216 IPR001841 -
Ahy10g1759 254 ProSiteProfiles Zinc finger RING-CH-type profile. 162 222 IPR011016 GO:0008270
Ahy10g1759 254 PANTHER RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 18 242 IPR039903 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1759 Ahy-Chr10 99375585 99376854 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1759 - - adu:107470742 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2199 20 122365031 122365786 Ahy10g1759 10 99375585 99376854 hybridization