Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1684 ATGCTTGTCTCTTCTGCAGGCGGAGGAGGAGGAGGAGGAGGAATCTCATGGGATCTCAAATGGCTTCTGCAGTGGGTTTTCTTAGCGGTTGTCGTCGCCGTTGGATTGCACGCTCTCGTCAAGAACACCGCTTCAAGATACTTTGAGGTTCACGCCAATTTCGATTCTGATCGGACTCATCCCATGCCTTCTTCTCCCTCCGCCGCCGCCGCCATTGCAATGGACCAACCTCTTTGCGCCGTCTGCTCCAAACACGCCTCTAGCAGGTGTTCCCGCTGCAAATCCGTCAGATACTGCTCCCAAGCGTGTCAACAGATGCACTGGAAATCCGATCATAAGTTGAAATGCAAGGAAGTTCATAGTACCATGAATTTGGCTCAATCTGGGCCAGCTAGTCCAGGGTTTAAAGCTTCTGCTGCTGTTAATAAAAGCACATCTTCAATTGCCCTAATACCTGCTTGTGGACGTGAAATTTCCAAGCCGATCAAGCAGCCTAAAAATCCTCTTTTTCCTTATGATGAATTTGTTAAATTCTTTAACTGGGATAAGCCTGGATTTCCTCCTTGTGGGCTCTTGAATTGTGGAAATAGCTGCTTTGCAAATGTGGTTCTCCAATGTCTCTCATTCACAAGGCCGCTTATTGCCTACCTGTTGAAAAACGGCCACCGCAGAGAATGCAGTCGTAATGATTGGTGCTTTCTGTGTGAATTTGAAATCCATGTTGAGAAAGCAAGGCAAAGTTCACAAGCATTTTCTCCAATGAACATTCTCTCTCGTTTGCCTAATATTGGTGGCACACTGGGTTATGGAAGACAAGAGGATGCTCATGAGTTCATGAGGTTTGCAATCGACACTATGCAGTCTGTATGCCTTGATGAATATGGTGGAGAAAAAGCTGTGCCTCCTAACCTTCAAGAGACAACACTTATTCAACACATTTTTGGTGGCCACCTTCAATCTGAGGTGTTTTGCACAAAATGTGAGAAGCAGTCAAATCAATACGAAAACATGATGGACTTGACTGTTGAAATTAATGGAGATGCTTCTTCCTTGGAGGAATGTCTAGATCAGTTCACTGCCAAGGAGTGGCTTCATGGTGAAAATATGTATAAATGTGATGGGTGCAAAGATTATGTCAAGGCTTGGAAACGTCTCACTGTGAAACGAGCTCCAAATATTCTTACTATTGCCTTAAAAAGATTTCAGAGTGGGAGGTTTGGCAAACTTAACAAGAGAGTAACGTTCCCTGAGACTCTAAATCTTAGCCCTTTCATGAGTGAAGTTGAAGATGGATCTGATATTTATAAGCTGTATGCTGTTGTAGTCCACATCGACATGCTGAATGCTTCCTTTTTTGGTCATTACATTTGCTACATTAAGGATTTCCATGGAGACTGGTATAGAATTGATGATTGGAAGGTAATGCAAGTGGAATTGGTGGAGGTACTTTCTCAAGGTGCATACATGTTGTTATACAGCAGGGTAACTGCTCGGCCATCAGGCCTTCAAACTACAGAATCTTCAGACACACACATGCAGACAGTTGAAGTGGAAGTGGAGCCCAGCCCAACTGAACAGGCCGAATGTCTCTCAAATATGGAGACTGTAACTTGCAATGGCACATGTGATGCTTTTCCAGCTGAACATAGTAGTAATTCAGAACTGAAGGTTTCTGCCTGTGAACAGTCTAAGGACATCCGCTTGATTGATGTTGCAAATGGGACTCCAAGTTGGGCAACCGAATCGTCTCATGTACCTTCTAAATCCGGCAAAGATTTGGAGGATATAGATATGAGGAGATCAAATCTGTGCTCATCTGTTGTGGAAGATATTTTATGCTGCACGGAAGAGCAAGACGATACTGATATGGCTAAGGTCAGTGTTTCTCCACGCTTGGCAAATGGATTTTCTTCCCTGAATGATTCTTCTGTTTCAATGGATTATCAAAACTCGGGGGAAGATCAAGAGCATGTAGAACTTGTCAAATGCAAGCCACTGACAGCACAAGGCCATGCAAATCATGGCAACGGGTATGCTAGTGCAAACAAATATGCTATTCCAGTTGAAGATGATGGCTCTGTGTTTTCTGGCGTTGGTTCTTTCTCCACTGAAACATCCGCATCAGAAATGCATCAATTGAAGCGGAGATTGCCATTTCATGGTTCTGAAACTGGCCACGCAAATGGAGTCAAGAAAGTGGAGGTATCTGGGGACAAGTTAACAACGTAG 2229 0.4401 MLVSSAGGGGGGGGISWDLKWLLQWVFLAVVVAVGLHALVKNTASRYFEVHANFDSDRTHPMPSSPSAAAAIAMDQPLCAVCSKHASSRCSRCKSVRYCSQACQQMHWKSDHKLKCKEVHSTMNLAQSGPASPGFKASAAVNKSTSSIALIPACGREISKPIKQPKNPLFPYDEFVKFFNWDKPGFPPCGLLNCGNSCFANVVLQCLSFTRPLIAYLLKNGHRRECSRNDWCFLCEFEIHVEKARQSSQAFSPMNILSRLPNIGGTLGYGRQEDAHEFMRFAIDTMQSVCLDEYGGEKAVPPNLQETTLIQHIFGGHLQSEVFCTKCEKQSNQYENMMDLTVEINGDASSLEECLDQFTAKEWLHGENMYKCDGCKDYVKAWKRLTVKRAPNILTIALKRFQSGRFGKLNKRVTFPETLNLSPFMSEVEDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDFHGDWYRIDDWKVMQVELVEVLSQGAYMLLYSRVTARPSGLQTTESSDTHMQTVEVEVEPSPTEQAECLSNMETVTCNGTCDAFPAEHSSNSELKVSACEQSKDIRLIDVANGTPSWATESSHVPSKSGKDLEDIDMRRSNLCSSVVEDILCCTEEQDDTDMAKVSVSPRLANGFSSLNDSSVSMDYQNSGEDQEHVELVKCKPLTAQGHANHGNGYASANKYAIPVEDDGSVFSGVGSFSTETSASEMHQLKRRLPFHGSETGHANGVKKVEVSGDKLTT* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1684 742 CDD Peptidase_C19E 188 493 - -
Ahy10g1684 742 Gene3D - 66 122 - -
Ahy10g1684 742 SUPERFAMILY Cysteine proteinases 185 516 IPR038765 -
Ahy10g1684 742 SUPERFAMILY HIT/MYND zinc finger-like 75 121 - -
Ahy10g1684 742 ProSiteProfiles Zinc finger MYND-type profile. 79 116 IPR002893 -
Ahy10g1684 742 Gene3D Cysteine proteinases 185 505 - -
Ahy10g1684 742 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 28 659 - -
Ahy10g1684 742 MobiDBLite consensus disorder prediction 719 742 - -
Ahy10g1684 742 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 189 495 IPR028889 -
Ahy10g1684 742 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 19 28 659 - -
Ahy10g1684 742 Pfam MYND finger 79 116 IPR002893 -
Ahy10g1684 742 ProSitePatterns Zinc finger MYND-type signature. 79 116 IPR002893 -
Ahy10g1684 742 Pfam Ubiquitin carboxyl-terminal hydrolase 189 492 IPR001394 GO:0004843|GO:0016579
Ahy10g1684 742 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 190 205 IPR018200 GO:0004843|GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1684 Ahy-Chr10 96535806 96539552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1684 14 518 Miscellaneous Gene Families AT4G31670 61.057 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1684 K11855 - gmx:100810577 988.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2121 20 118691358 118695106 Ahy10g1684 10 96535806 96539552 hybridization