Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1552 ATGAGAGGAACAATGGGAAATTCTCCTCATGCTGTTGAACCTCGACACCGTTTGCCTACAACCATTGAAGATTTATACAAACGAAGATTGCCAAAAAATAACAAAGCAAAAGAGGTAGAGAAACCATTCCATTTAACTGTACAAGATAGGAGCTCAAGATGCAAGTTCTCATTCTTAAAGCTTCTGTTATTGGTAACCATTTGTGGAACTTTTGTAACACTCCTCTACTCTCCAGAGGTCTACAATACCACCCATTTAACAACCTCTGGCTCTGTGTGGTTATGGGGTGGGTCGGATCCTAGATATATCGCGAATGTAGATACTCGTTTGAGTGATATTGCGAAAATCACCAAGAAATTAACAGGGAAAGATAAAGTTCAGGGCATTGGGCTTGTGAATTTCAACAAGACAGAGATAAGTGGTTTTGAGAATCTTAATCCTGATGCCACACATGTTGAATTGAACTTGGAGTATGCTGCAAGAAATGTGACATGGGAGAGCCTATACCCCGAATGGATCGATGAGGAAGAAGAGGAGGAAGTTCCCGTTTGCCCCTCTCTGCCAAGTCTGAGGTCTCCCGGCATACGACTTAATCTCATCGCCGTCAAGCTTCCTTGCCGGAAAGGTGTTGGCAAGAATTGGTCTAGAGATGTTGCTCGTTTGCATCTTCAGCTCGCCGCGGCTCGCCTTGCAGCCTCTTTTAAAGGAAACTACACTGTGCATGTTCTCTTTGTTACCGATTGCTTCCCAATGCCGAATCTGTTTACCTGCAAAGAACTTGTTGGACGCGAAGGAAATGCATGGTTATACAGACCAAACTTGAGTGTTTTGAGACAAAAGGTTCAACTTCCTGTAGGATCCTGTGAACTCACAATTCCTATGAGGGGCAAAGAGTTGGTTTACAATGGAAATGCTGAGAGAGAAGCGTACGCAACAATTCTGCATTCAGCACATGTTTATGTGTGTGGAGCAATCGCGGCGGCGCAAAGCATCCGCATGGCCGGATCAAGTCGAGACCTTGTTATACTTGTTGATGAGACAATAAGTGGATATCACAGAAGTGGTTTGGAAGCAGCAGGGTGGAAAGTCAGGACAATAAAGAGGATCAGAAACCCCAAAGCCGAAAAGGATGCTTACAATGAATGGAACTACAGCAAGTTCCGCTTATGGCAACTAACAGATTATGACAAGATAATATTCATAGATGCAGATTTGCTCATACTAAGAAACATAGATTTCCTCTTTGGCATGCCGGAAATCACTGCTACTGGAAACAATGCCACGCTTTTCAACTCTGGAGTCATGCTGGTTGAGCCATCAAATTGCACATTCCAGCTCCTAATGGATCACATAAACGAGATTGAATCTTACAATGGAGGAGACCAGGGATACCTGAATGAGATATTCACATGGTGGCATAGGATTCCAAGACACATGAACTTCTTGAAGCATTTCTGGATCGGCGACGAAGAAGAGAAGAAAAAAATGAAAACCTTGTTGTTTGGTGCCGAGCCTCCAATCCTCTATGTTCTTCACTACCTAGGCTTGAAGCCTTGGTTATGCTTCCGCGACTATGATTGCAACTGGAACTTTGACATATTCCATGAGTTTGCGAGCGACGTTGCGCACGCCAAGTGGTGGAAGGTGCATGATGCAATGCCTGAGGTTCTGCAACAATTCTGTTTGCTGCCATCAAAGCAAAAGGCTCAGTTAGAATGGGATCGGAGACAAGCCGAGACAGCAAACTACACAGATGGTCACTGGAGACTCAAAATTAAAGATCCTCGGTTGAAGAAATGTATCGATAACTTGTGCCATTGGAAGAGCATGTTGAGGCACTGGGGAGAGACAAATTGGACTGATGATGAGTCTTACCATCCAACACCACCTGCCATTACTACATCATCTCTTTCTGCTTTGTAA 1923 0.4405 MRGTMGNSPHAVEPRHRLPTTIEDLYKRRLPKNNKAKEVEKPFHLTVQDRSSRCKFSFLKLLLLVTICGTFVTLLYSPEVYNTTHLTTSGSVWLWGGSDPRYIANVDTRLSDIAKITKKLTGKDKVQGIGLVNFNKTEISGFENLNPDATHVELNLEYAARNVTWESLYPEWIDEEEEEEVPVCPSLPSLRSPGIRLNLIAVKLPCRKGVGKNWSRDVARLHLQLAAARLAASFKGNYTVHVLFVTDCFPMPNLFTCKELVGREGNAWLYRPNLSVLRQKVQLPVGSCELTIPMRGKELVYNGNAEREAYATILHSAHVYVCGAIAAAQSIRMAGSSRDLVILVDETISGYHRSGLEAAGWKVRTIKRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFGMPEITATGNNATLFNSGVMLVEPSNCTFQLLMDHINEIESYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWIGDEEEKKKMKTLLFGAEPPILYVLHYLGLKPWLCFRDYDCNWNFDIFHEFASDVAHAKWWKVHDAMPEVLQQFCLLPSKQKAQLEWDRRQAETANYTDGHWRLKIKDPRLKKCIDNLCHWKSMLRHWGETNWTDDESYHPTPPAITTSSLSAL* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1552 640 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 305 555 IPR029044 -
Ahy10g1552 640 Pfam Glycosyl transferase family 8 314 520 IPR002495 GO:0016757
Ahy10g1552 640 SUPERFAMILY Nucleotide-diphospho-sugar transferases 308 553 IPR029044 -
Ahy10g1552 640 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 1 21 617 - -
Ahy10g1552 640 CDD GT8_Glycogenin 308 553 - -
Ahy10g1552 640 PANTHER GLYCOGENIN SUBFAMILY MEMBER 21 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1552 Ahy-Chr10 90437658 90441339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1552 13 640 Glycosyltransferase AT3G18660 65.062 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1552 K20890 - gmx:100809361 1159.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1989 20 112956497 112960171 Ahy10g1552 10 90437658 90441339 hybridization