Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0870 ATGACACAGCAGAATGTGGTGGTGTGCAACACCAAATCCAGCGGTGACTTGTCGGTTTTTCCGGCGGCGAGTGCGGCGCAAAAGCCACCGGTGGGTGGAGGGTACATTTCCATTTCAAGGAGGCCAAGGAGGGTTCTCAAGAACCTTGAGATCAATGGAGATAACAGAATCAACGCTTTGGTTGAATCCATGAGAGCCTCTTCCCCAACTCATCTCATGTCCACTCCTTCTTTGACTGAAGAACATAGTTCTTGGATTCTTCGCTATCCATCGGCATTGGACATGTTTGACGAAATTATGAAAGGATCCAAGGGGAAGCAAATTGTGATGTTCCTTGACTACGACGGAACGTTGTCTCCTATAGTCGAGGACCCTGACCGTGCTTTCATGTCGAATTCGATGAGGAAAACGGTTAGAAAACTCGCAAGGTATTTTCCAACTGCCATAGTCACGGGAAGATGCAAAGACAAGGTCTACAATTTTGTTCGATTGGCAGAGCTATACTATGCTGGGAGCCACGGAATGGATATTAAAGGACCAACAAGAACTTCCAAGTACAACAGAGATAGTAACGCAGAAGGAGTTCTTTTTCAACCAGCAAGTGAATTTCTTCCCATGATAGATGAGGTGTACCAGCAATTGTTGGACAAGACAAAATCAACTCCTGGAGCTAAGGTGGAGAACAACAAGTTTTGCGTCTCAGTTCATTTTCGTTGTGTTGATGAAAAGAAATGGACTGAACTTTTGCATCAAGTTCAATCAGTGTTAAAAGAGTACCCTAAGCTTCGTCTTACACAAGGAAGGAAGGTAGTTGAGATCCGCCCCACTATTAAATGGGACAAAGGCAAAGCCTTGGAATTTTTACTAGAGTCTCTCGGATTCGCCAACTGTAATGATGTATTTCCAATTTATATTGGTGATGATCGAACCGATGAAGATGCTTTCAAGGTGATGGAATTTCTTCAACGCTTGGTGGAATGGAAACAGGTATCCATGCGAGCACGTTAG 1008 0.4425 MTQQNVVVCNTKSSGDLSVFPAASAAQKPPVGGGYISISRRPRRVLKNLEINGDNRINALVESMRASSPTHLMSTPSLTEEHSSWILRYPSALDMFDEIMKGSKGKQIVMFLDYDGTLSPIVEDPDRAFMSNSMRKTVRKLARYFPTAIVTGRCKDKVYNFVRLAELYYAGSHGMDIKGPTRTSKYNRDSNAEGVLFQPASEFLPMIDEVYQQLLDKTKSTPGAKVENNKFCVSVHFRCVDEKKWTELLHQVQSVLKEYPKLRLTQGRKVVEIRPTIKWDKGKALEFLLESLGFANCNDVFPIYIGDDRTDEDAFKVMEFLQRLVEWKQVSMRAR* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0870 335 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 110 319 IPR006379 -
Ahy10g0870 335 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 318 IPR044651 GO:0004805|GO:0005992
Ahy10g0870 335 SUPERFAMILY HAD-like 109 318 IPR036412 -
Ahy10g0870 335 Gene3D - 190 276 - -
Ahy10g0870 335 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 318 - -
Ahy10g0870 335 CDD HAD_TPP 109 319 - -
Ahy10g0870 335 TIGRFAM T6PP: trehalose-phosphatase 106 319 IPR003337 GO:0003824|GO:0005992
Ahy10g0870 335 Pfam Trehalose-phosphatase 111 322 IPR003337 GO:0003824|GO:0005992
Ahy10g0870 335 Gene3D - 110 318 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0870 Ahy-Chr10 12844055 12849165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0870 104 316 Trehalose Biosynthesis Gene Families AT1G70290 26.786 1.35e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0870 K01087 - gmx:100794430 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1178 20 20821843 20826708 Ahy10g0870 10 12844055 12849165 hybridization