Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0825 ATGTTCTCATGGTTGCAATTTTATTTTGAGTTGCCACGAACTACTACTACTTTACCCTCTTATATACACTCTGTCTCACTATTTTCACTCTTATTATTATTACTAGCTCCATTTGCAGAAGCAATGACATCTTGGGTGTTTGAGGAGAATGGACACGACGAGGGAAATCAACAACCCTCCGATTTTATCAACACGAATCTGACAGCCACAAATCTCTCACTTCCAACTGAAACCTTTCTCAGAGCCGCGGTTTCACTCAAGGACCAGGTGGTGGAGGAGACGTGGAAGCGGAGGGAAATGGTTGATCCAACGGTGTATAAGGGTTTGCTGGGCACAGCTTTCACTTGCTTGAGGTCGTACGAGGTCACCGGTAACCACACGGACTTGCAATTATGTGCAGAGATTGTCGACACGTGCGCCACCGTTGCACGTGACTCCCTCAGGCACGTGACGTTTTTATGTGGAAGAGGAGGAGCATATGCGCTTGGTGCGGTTGTCGCTAATTACATGGGGGACCCTCGGAAGCGTGACCTGTTTTTGGGTCTATTCGTTGAGGTTGCAAAAGAGAGAGCCCTGCCTGTTGGACCTGAGGAAGGTGGTTTTGGAATGTCATACGATCTTCTATACGGCCGCGCCGGATTCTTATGGGCCGCGCTATTCATAAAGAAGTACCTAGGAGATGAGGCAGTTCCAAGCGATATTCTAATGCCAATTATCGATGCAATGTTGGCCGGAGGTAGGGCAGGAGCCTCCGACATTAAGGACTGTCCATTGATGTATCGATGGCATGGGACGAGGTACCTTGGCGCAGCGAACGGCCTAGCCGGAATCCTGCATGTGCTGCTCCATTTTCCGCTTCCCGGCGAGGATGCCGAAGATGTGAAGGGAGCTTTAAGGTACTTGATGAGTAAACGGTTCCCTCATAGTGGCAACTACCCGTCGAGCGAAGGGAATCCAAGGGATAAGTTGGTGCAATGGGGTCATGGCGCAACCGGCATGGCCATTACTCTGTCCAAAGCTGCAGAGGTTTTTCCAAATGACAGAGAACTCCGAGACGCGGCAATCGAAGCGGGGGAGGTAGTGTGGAAGAGTGGCCTGGTGAAGAAGGTAGGACTTGCGGACGGCGTGGCAGGAAACGCCTACGGCTTCCTTTCGCTCTTCAGACTAACCAAAGAACAGATCTACGAAGAGAGAGCAAAAGTCTTCTCATGTTTCTTGTACCGCAATGGAAGTTCTCTTATTGCGGGTGCTGATGGTGGAAATGCTTATTCCCTCTTCCAAGGTATTGCTGGAACTGCATGCCTCTGGTTTGATCTTGTTGCACCTCATAACTCTAGATTTCCGTGTTATGAATTATAG 1359 0.496 MFSWLQFYFELPRTTTTLPSYIHSVSLFSLLLLLLAPFAEAMTSWVFEENGHDEGNQQPSDFINTNLTATNLSLPTETFLRAAVSLKDQVVEETWKRREMVDPTVYKGLLGTAFTCLRSYEVTGNHTDLQLCAEIVDTCATVARDSLRHVTFLCGRGGAYALGAVVANYMGDPRKRDLFLGLFVEVAKERALPVGPEEGGFGMSYDLLYGRAGFLWAALFIKKYLGDEAVPSDILMPIIDAMLAGGRAGASDIKDCPLMYRWHGTRYLGAANGLAGILHVLLHFPLPGEDAEDVKGALRYLMSKRFPHSGNYPSSEGNPRDKLVQWGHGATGMAITLSKAAEVFPNDRELRDAAIEAGEVVWKSGLVKKVGLADGVAGNAYGFLSLFRLTKEQIYEERAKVFSCFLYRNGSSLIAGADGGNAYSLFQGIAGTACLWFDLVAPHNSRFPCYEL* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0825 452 PRINTS Eukaryotic LanC-like protein family signature 235 250 IPR020464 -
Ahy10g0825 452 PRINTS Eukaryotic LanC-like protein family signature 341 362 IPR020464 -
Ahy10g0825 452 PRINTS Eukaryotic LanC-like protein family signature 438 452 IPR020464 -
Ahy10g0825 452 PRINTS Eukaryotic LanC-like protein family signature 303 318 IPR020464 -
Ahy10g0825 452 PRINTS Eukaryotic LanC-like protein family signature 386 404 IPR020464 -
Ahy10g0825 452 PANTHER LANC-LIKE PROTEIN 58 452 - -
Ahy10g0825 452 SUPERFAMILY LanC-like 86 452 - -
Ahy10g0825 452 CDD euk_LANCL 105 448 - -
Ahy10g0825 452 PRINTS LanC-like protein superfamily signature 205 220 IPR007822 -
Ahy10g0825 452 PRINTS LanC-like protein superfamily signature 323 343 IPR007822 -
Ahy10g0825 452 PRINTS LanC-like protein superfamily signature 102 120 IPR007822 -
Ahy10g0825 452 PRINTS LanC-like protein superfamily signature 267 283 IPR007822 -
Ahy10g0825 452 PRINTS LanC-like protein superfamily signature 370 383 IPR007822 -
Ahy10g0825 452 PRINTS LanC-like protein superfamily signature 422 439 IPR007822 -
Ahy10g0825 452 Pfam Lanthionine synthetase C-like protein 100 452 IPR007822 -
Ahy10g0825 452 Gene3D - 38 452 IPR012341 GO:0005975
Ahy10g0825 452 PANTHER LANC-LIKE PROTEIN GCL1 58 452 - -
Ahy10g0825 452 SMART LANC_like_2 99 452 IPR007822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0825 Ahy-Chr10 11393943 11403912 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0825 - - gmx:100785406 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1124 20 18483193 18493693 Ahy10g0825 10 11393943 11403912 hybridization