Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0468 ATGCAAATAAAACCACACACAACAACACCTCTCTTCAAAAACACCCCAAAGCCAAGACCAAAAACACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATGGCTACCACAGACCCGCCAGAGAAGCTGAAATTAGAAACAAGCTTCGACTATGAGAAGAACGAAGAGAAAAAAGAAGAAGAAGAAGAAGTGTCGCCGGTTGAAGAAGTGCGACTAACGGTTTCGAACACTGACGATCCAAGCCAACCAGTGTGGACCTTCAGAATGTGGTTCTTAGGTCTAATCTCATGCGCGCTATTATCTTTCCTCAACCAGTTCTTCGCTTACCGTACGGAGCCACTCATCATAACTCAGATCACCGTTCAGATCGCCACACTTCCCATCGGTCACTTCATGGCGGCGGTGCTGCCAACTACCAAGTTTCGCCTCGGATCCAAAACGATGTCGTTTAACCCCGGCCCTTTTAACATGAAGGAGCACGTGCTCATAACCATATTCGCGAATGCGGGTAGCGCTTTCGGGTCCGGGTCGCCCTATGCGGTGGGTATTGTGAACATAATTAAGGCCTTTTATGGACGCAGCATCTCTTTCTTTGCTTCCTGGCTTCTCATCATTACTACTCAGGTTCTGGGTTATGGATGGGCTGGGTTGCTAAGGAAGTACGTTGTGGAACCAGCTCATATGTGGTGGCCTGGCACTCTCGTTCAAGTCTCACTTTTCCGAGCTTTGCATGAGAAAGACAACAGCCATGGAATTTCACGGGCAAAGTTCTTCTTCATTGCACTAGTGTGCAGTTTTTCATGGTACGTGGTACCTGGATTCTTCTTCACAACGCTAACAAACATCTCATGGGTCTGTTGGGTGTTCTCCAAATCAGTAACAGCTCAACAACTAGGCTCAGGCATGAGAGGCTTAGGCCTTGGAGCCATCACACTTGATTGGAGCGCCGTGGCATCGTTCTTGTTCAGCCCTCTCATCTCGCCCTTTTTCGCCATTGTCAATGTCTTTGTTGGCTATGCAATGATAGTATATGTGGTTATTCCTATTGCATATTGGGGTTTGAATGTGTATAATGCAAATAGATTCCCTATTTTTTCATCACATTTGTTCACAGCTCAAGGTCAACCTTATAACATATCTGCTATTGTTAATGACAAGTTTGAGTTGGATATTGCCAAGTATCAAGAGCAAGGGAGAATCAATCTTAGTGTCTTTTTTGCTCTCACTTATGGTTTTGGATTTGCTACCATTGCATCTACCATCACACACGTTGCTTGCTTCTATGGAAGGGAGATTATGGAACGTTATCGTGCTTCATTCAAAGGCAAAGAAGATATCCACACAAAACTGATGAAGACATACAAAGACATACCATCTTGGTGGTTTCATTTGTTGCTAGGTGTTGCTTTAATGGTTTCTCTAGCACTATGCATCTTTTTAAAAAACCAAGTTCAAATGCCATGGTGGGGACTTCTCTTTGCTGCGGTCTTATCCTTTGGATTTACCCTTCCAATTAGCATCATTACTGCCACCACAAACCAGACACCAGGGTTGAATATCATCACCGAGTATGTCTTTGGTCTCATATACCCTGGAAGGCCAATTGCAAATGTTTGCTTCAAAACTTATGGCTACATCAGCATGTCTCAAGCCGTCTCGTTTCTCAGTGATTTCAAACTTGGACACTACATGAAAATCCCCCCAAGATCAATGTTCTTGGTGCAGTTCATAGGTACAATGCTTGCTGGAACTATCAACATAGGGGTAGCATGGTGGTTGCTAAACTCTATCAAAAACATATGCCATGATGATCTCCTTCCAGAAGGTAGTCCCTGGACATGCCCCGGTGACCGTGTATTCTTTGATGCATCAGTAATCTGGGGATTGGTAGGACCAAAGAGAATCTTTGGCTCCAAAGGAAACTACAGTGCAATGAATTGGTTCTTCCTTGGTGGTGCAATAGGGCCAGTAATTGTTTGGCTATTGCACAAGGCATTCCCTAAACAATCATGGATACCCTTCATCAACCTCCCAGTTCTCCTTGGAGCAACCGGAATGATGCCACCGGCAACACCATTGAACTACAATGCCTGGATTTTCGTCGGAACCATGTTCAACTTCTTTGTGTTCCGATACAGAAAGGGTTGGTGGCAGAGATATAACTACGTCCTATCGGCCGCCCTTGATGCCGGGGTGGCGTTTATGACTGTGCTGCTGTTCTTTTCTCTGGGATTGGAGAACAAGAGTATTAGTTGGTGGGGAAATGATGGTGAACATTGTCCATTAGCATCTTGTCCAACAGCCAAAGGCATTGTGGTTGATGGTTGCCCAACACACTAA 2355 0.4505 MQIKPHTTTPLFKNTPKPRPKTPLSLSLSLSLSLSLSLMATTDPPEKLKLETSFDYEKNEEKKEEEEEVSPVEEVRLTVSNTDDPSQPVWTFRMWFLGLISCALLSFLNQFFAYRTEPLIITQITVQIATLPIGHFMAAVLPTTKFRLGSKTMSFNPGPFNMKEHVLITIFANAGSAFGSGSPYAVGIVNIIKAFYGRSISFFASWLLIITTQVLGYGWAGLLRKYVVEPAHMWWPGTLVQVSLFRALHEKDNSHGISRAKFFFIALVCSFSWYVVPGFFFTTLTNISWVCWVFSKSVTAQQLGSGMRGLGLGAITLDWSAVASFLFSPLISPFFAIVNVFVGYAMIVYVVIPIAYWGLNVYNANRFPIFSSHLFTAQGQPYNISAIVNDKFELDIAKYQEQGRINLSVFFALTYGFGFATIASTITHVACFYGREIMERYRASFKGKEDIHTKLMKTYKDIPSWWFHLLLGVALMVSLALCIFLKNQVQMPWWGLLFAAVLSFGFTLPISIITATTNQTPGLNIITEYVFGLIYPGRPIANVCFKTYGYISMSQAVSFLSDFKLGHYMKIPPRSMFLVQFIGTMLAGTINIGVAWWLLNSIKNICHDDLLPEGSPWTCPGDRVFFDASVIWGLVGPKRIFGSKGNYSAMNWFFLGGAIGPVIVWLLHKAFPKQSWIPFINLPVLLGATGMMPPATPLNYNAWIFVGTMFNFFVFRYRKGWWQRYNYVLSAALDAGVAFMTVLLFFSLGLENKSISWWGNDGEHCPLASCPTAKGIVVDGCPTH* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0468 784 PANTHER OLIGOPEPTIDE TRANSPORTER 4 62 783 - -
Ahy10g0468 784 MobiDBLite consensus disorder prediction 1 25 - -
Ahy10g0468 784 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 68 752 IPR004648 GO:0055085
Ahy10g0468 784 MobiDBLite consensus disorder prediction 49 70 - -
Ahy10g0468 784 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 73 750 IPR004813 GO:0035673
Ahy10g0468 784 PANTHER ISP4 LIKE PROTEIN 62 783 IPR004648 GO:0055085
Ahy10g0468 784 Pfam OPT oligopeptide transporter protein 90 747 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0468 Ahy-Chr10 4629565 4635674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0468 65 782 Organic Solute Cotransporters AT5G64410 79.889 0.0 1230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0468 - - ahf:112714781 1572.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0670 20 7325630 7332019 Ahy10g0468 10 4629565 4635674 hybridization
Ahy3g2925 3 125569794 125573456 Ahy10g0468 10 4629565 4635674 PCT