Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0462 ATGGCTTCCGCCGTCCTAGCCAACCGAAACGAACCTAATTGGCCGCAGCATAGAGGCGGTGTAGCTGGATTCATGGGGAAAGTACCATTTTCTAACCCTAACCCTAATTCAAAATTTGGTAATAAAAAGAATCAATCGGCGTTAGATGATGCTTCCTCCATCAATCGGAGGTCCAACGATGGCAACCATTACCAATATGTCACGTTCAACGTGGCGTCGTACTCAAAGAAGGAACTGAACGAGCTCAAGAATCGCTTGATCTTGGAGCTCGAGCAGATTCGAAAGCTCAAGAGTCGAATCGAGAATGGAGAATTTCAACCCAAGCAGAGCTTCAATGGCCCTCCCAAAAAATCGTCGACCAAGAAGATCTCTGGCAACAAACGGCCATTTCCGTTGGTGAATTCCATCACCAAAGATTTGAAACGATCGAATTCAGAGATTGGAAACTTGATGAAGTCCTGCTCGCAGGTTCTACAGAAGATCATGAAGCACAAGGTTGGGTGGATCTTCAACGCCCCCGTTGATGTCGTTGGAATGGGTCTTCACGATTACTATGATATAGTGAAGAAGCCCATGGATCTGGGCACCGTAAAGTCCAATCTCGCGAAGAATGTGTACTCTACGCCGTCGGATTTTGCTGCCGATGTGCGATTGACGTTTAAAAATGCGCTGACGTATAATCCCCCTGGTCACGATGTGCACAACATGGCTGACCTGCTTTTAACCAAGTTTGAAGAGCTGTATCGTCCTGTGCATGAGAAATTCGAGGATTCGATAAGGCAGCAGGATCAGGATGTTGATGAGGAATTGCAGGCCAGTTCATGGAATCATGTGGAACCGGAGAGGGTTGAGAGGGTTAAGAACAAGAAGGAGAATGTGATCCCTCCGGCAAGGTTTCAACCCGAGCCAGTGCAGGCCCCTGCGAGCTCTTCGAACCCTCCAATGGTGCAGTCGCCTGTGCGCACCCCTTCCCCTATGAGAGCCCAGCCGGTGAAGCCTCTGAAGCAGCCAAAGCCTAAGGCGAAGGACCCCAATAAGAGGGAGATGAGCCTTGAGGAGAAACACAAGTTGGGTATTGGGCTGCAGAGTTTGCCTCCTGAGAAAATGGAGCAGGTGGTACAGATCATAAGGAAGAGGAATGGGAACCTTAAGCAGGATGGGGATGAGATTGAGCTTGATATTGAGGCTGTTGACACTGAGACCCTTTGGGAACTTGATCGATTGGTGACAAATTGGAAGAAGATGATGAGCAAAATTAAGCGGCAGGCACTACTTGGCAACTTGAACAACAACAATGTCGCATCCAATAAATCCAATGGGGAATTGGCTATTGGTGAGAAGGTTGAGGCGGCTCCGGCTGAGGTGAAGAAACCAAAGAAAATGGATGCTGGGGATGAGGATATTGACATTGGGGATGAGATGCCGATGAGTACCTTCCCCCCTGTGGAGATTGAGAAAGATAAAGAAGTCGCCGGCGGCCATGCTAGTAGTAGTTCTAGTAGCTCCAGCAGTTCAAGTAGTGATTCCTCGTCATCTAGTGATTCAGATTCAGCGAGTTCCTCAAGGAGTGATTCTGAAGCAGACAATGGTCACTTGTAG 1599 0.4841 MASAVLANRNEPNWPQHRGGVAGFMGKVPFSNPNPNSKFGNKKNQSALDDASSINRRSNDGNHYQYVTFNVASYSKKELNELKNRLILELEQIRKLKSRIENGEFQPKQSFNGPPKKSSTKKISGNKRPFPLVNSITKDLKRSNSEIGNLMKSCSQVLQKIMKHKVGWIFNAPVDVVGMGLHDYYDIVKKPMDLGTVKSNLAKNVYSTPSDFAADVRLTFKNALTYNPPGHDVHNMADLLLTKFEELYRPVHEKFEDSIRQQDQDVDEELQASSWNHVEPERVERVKNKKENVIPPARFQPEPVQAPASSSNPPMVQSPVRTPSPMRAQPVKPLKQPKPKAKDPNKREMSLEEKHKLGIGLQSLPPEKMEQVVQIIRKRNGNLKQDGDEIELDIEAVDTETLWELDRLVTNWKKMMSKIKRQALLGNLNNNNVASNKSNGELAIGEKVEAAPAEVKKPKKMDAGDEDIDIGDEMPMSTFPPVEIEKDKEVAGGHASSSSSSSSSSSSDSSSSSDSDSASSSRSDSEADNGHL* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0462 532 MobiDBLite consensus disorder prediction 25 59 - -
Ahy10g0462 532 Pfam Bromodomain 154 238 IPR001487 GO:0005515
Ahy10g0462 532 ProSiteProfiles Bromodomain profile. 162 234 IPR001487 GO:0005515
Ahy10g0462 532 Gene3D - 114 270 IPR036427 GO:0005515
Ahy10g0462 532 MobiDBLite consensus disorder prediction 1 20 - -
Ahy10g0462 532 CDD Bromo_plant1 150 248 IPR037377 -
Ahy10g0462 532 PANTHER TRANSCRIPTION FACTOR GTE2 41 528 - -
Ahy10g0462 532 MobiDBLite consensus disorder prediction 259 350 - -
Ahy10g0462 532 MobiDBLite consensus disorder prediction 104 120 - -
Ahy10g0462 532 PRINTS Bromodomain signature 215 234 IPR001487 GO:0005515
Ahy10g0462 532 PRINTS Bromodomain signature 165 178 IPR001487 GO:0005515
Ahy10g0462 532 PRINTS Bromodomain signature 197 215 IPR001487 GO:0005515
Ahy10g0462 532 PRINTS Bromodomain signature 181 197 IPR001487 GO:0005515
Ahy10g0462 532 MobiDBLite consensus disorder prediction 104 128 - -
Ahy10g0462 532 SMART bromo_6 143 253 IPR001487 GO:0005515
Ahy10g0462 532 Coils Coil 76 99 - -
Ahy10g0462 532 ProSiteProfiles NET domain profile. 339 420 IPR027353 -
Ahy10g0462 532 MobiDBLite consensus disorder prediction 336 350 - -
Ahy10g0462 532 MobiDBLite consensus disorder prediction 259 292 - -
Ahy10g0462 532 Gene3D - 342 419 IPR038336 -
Ahy10g0462 532 PANTHER OSJNBA0053K19.4 PROTEIN 41 528 - -
Ahy10g0462 532 MobiDBLite consensus disorder prediction 453 532 - -
Ahy10g0462 532 MobiDBLite consensus disorder prediction 30 59 - -
Ahy10g0462 532 Pfam Bromodomain extra-terminal - transcription regulation 348 410 IPR027353 -
Ahy10g0462 532 SUPERFAMILY Bromodomain 145 255 IPR036427 GO:0005515
Ahy10g0462 532 MobiDBLite consensus disorder prediction 493 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0462 Ahy-Chr10 4554972 4557681 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0462 - - adu:107468545 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g0663 20 7197771 7200674 Ahy10g0462 10 4554972 4557681 hybridization