Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2314 ATGGAATCTATACTAGCTCGGGCGCTAGAGTACACCCTCAAGTACTGGCTCAAATCCTTCTCCAGAGACCAGTTCAAGCTTCAAGGCCGCACCCTTCACCTCTCTAATTTAGATATCGATGGGGATGTGTTGCATTCTAGTTTGGGATTGCCTCCGGCGCTTAATGTGGCCACCGCCAAAGTTGGAAAATTGGAGATCACGCTGCCTTCGGTGAGTAATGTCCAAGCAGAGCCAATCATAGTGCAAATTGATAGGCTTGATTTGGTTCTTGAGGAGAATGCTGATTTTGATGCTTCTGTTAGTCCTAATAGTACCACACCGTCGGCTGCCTCCTCGAAGGGTAGTGGTTACGGTTTTGCTGATAAGATTGCGGATGGCATGACTATACAGATTCATACAGTTAATCTATTACTTGAAACTCGTGGGGGTGCTCGCCGGAAAGGGGGAGCAACATGGACACCACCTCTGGCATCTATCACAATACGCAACCTTTCGCTGTATACCACAAATGAAAGCTGGCAGGTTGTAAATCTTAAGGAAGCAAGGGAATTCTCCAGTAACAAGAAGTACATATATGTTTTCAAAAAACTGGAATGGGAGTCTTTGTCTATTGATCTTTTGCCTCATCCTGACATGTTCATGGATGCTACATCAGGCCGCTCCCAAGAAGGATCAAACTTGAGAGATGATGACGGTGCAAAGCGAGTATTTTTTGGAGGAGAGCGTTTTATAGAAGGAATATCGGGAGAAGCATATATCACACTTCAGAGAACCGAGTTGAATAGTCCACTTGGGCTTGAGGTTCAGTTGCACATCAATGAAGCTGTTTGCCCTGCATTAAGTGAACCAGGTCTACGTGCACTTCTCCGTTTTATGACTGGATTATATGTTTGTCTAAATCGGGGAGATGTTGATTTAAAGGCTCAACAGCGATCCACTGAAGCAGCTGGGCGTTCTCTTGTCTCAATTGTTGTAGATCATATATTTCTTTGTATTAAAGATACTGAATTCCAGCTCGAGCTTCTGATGCAGTCCCTCCTTTTCTCTCGGGCCAGTGTTTCTGAAGGAGATAGTGACAATAACTTGACCAGGATTACAATTGGTGGACTATTTTTGAGGGACACCTTTTCATCTCCTCCATGTACCCTAGTGCAACCATCAATGCAAGCTGTCACAAAAGATGCTTTCCACGTGCCTGAATTTGCTAGGAGCTTTTGCCCTCCAATATATCCTCTAGGAGAACAGCAGTGGCAGTTGATTGAAGGAACACCTCTAATATGCCTCCATGCACTTCAGATTGTGCCTTCTCCACTTCCACCATCCTTTGCTTCTCAAACGGTTATTAACTGTCAGCCTCTCATGATTCATCTTCAAGAAGAAACATGCCTGAGGATATCCTCATTCTTAGCTGATGGTATTGTTGTCAATCCTGGTGATATTTTACCGGATTTCTCAATAAAATCCTTTATGTTCACTCTCAAGGGACTAGACCTTACAGTTCCTTTGGACAAGGTGGAGTTTGATATTTCTAAAAACGAAATGGAAAATACTACAATCCAGACCTCCTTTACTGGAGCAAAGCTCCATATTGAAAGCCTTTTCTTTTTGGATTCACCCTCGTTGAAACTAAGAATGTTGAACCTGGAAAAGGATCCAGCTTGCTTCAGTCTTTGGGAAGGTCAGCCAGTTGATGCTAGCCAGAAGAAGTGGACTGCCAGAGCATCTCAGCTTACTTTGTCTCTAGAAGCATGTCATGGCACAACTGGACGCCAAAATTCCCTCGGACAAACTGCAGGATTGTGGAGATGTGTTGATCTGAAAGATGCTTGCATCGAAGTGGCTATGGCAACTGCTGATGGCAGTCCATTGTTAAAAGTTCCTCCCCCAGAGGGAATTGTTAGGGTAGGTGTTGCTTGTGAACAGTATCTATCCAACACTTCTGTTGAACAGTTGTTTTTTGTCCTGGGCCTCTATGATTATTTTGGGAGAGTGAGTGAAAAAATAGCAATGGCGGGAAAAAGAAAACAATTAGAGGACAGTAGGGACAAGTCTTTTAGTGGAAAGCTGATGGACAAGGTTCCTAGTGACACTGCTGTGAGCTTAACAGTGAGAGACCTCCAACTTCGATTTCTAGAGCCTTCTTCAATGAATGTTGAGGGAATGCCTTTAGTACAGTTTATTGGAGATGATCTGTTCATTAGTGCCACCCATAGAACCCTTGGTGGTGCTATTGTCGTTTCATCTACTTTACGTTGGGAGAGTATTGAGATAGATTGTGTGGATGCTGAGGGGCACTTACCGTGTGAAAATGGCTCATTCTTGAGCCCTAGCAAAAATGTTCCCTCACCAAGTGATAATGGATATCCTCAACTAAGGGCTGTTTTTTGGGTGCATAAGAACAAGAAACATCCAATTAATGGAAATGCTCTTTCAGTCCCTTTTCTGGACATAAGCATGGTTCATGTAATTCCATTACTTGAACAAGACACGGAGTCTCATAGTTTAAATGTCTCAGCATCTGTGTCCGGCGTTCGTCTTGGTGGAGGAATGAACTATACTGAAGCCCTCCTGCATAGATTTGGAATACTTGGGCCTGATGGTGGCCCTGGGACAGGCCTCTGTAAAGGGTTGGAAAACTTGCAAAAAGGACCATTATCAAAACTTTTTAAGACAACACCTCTTGTTGATAATTCAGAAAATGTTGAAAGTATGAGCGATGGGAAAGATGCCAGTTTTCAACACTTGAAGAAGCCAGATGATGTTGATGTAACTATAGAATTGAGAGACTGGTTATTTGCTCTTGAAGGTGCACAACAGATGGCTGAACAGTGGTGGTTCTCAAGCCTTGGTGATTTAGACAGAGAAGAGAAGTGTTGGCACACAACTTTCCGAGGTTTACGTGTAAATGCAAAAACTAGGCCAAAGAATGTTCTGGATGGCAAAGCTTTGCACAGAATAAAACAAAATCCAATAGAACTTGTTACGGTTGGAGTTGAAGGGCTGCGAATCTTGAAGCCTCATACCCAAAACCACATTCCTTCATCAACGTTAATTGCAAATGGGGATAAAGAATATGCTAACACAGCAGAGGGAGTTGGTCTTGAAGTTCGCTTGATATTATGTGAGGATAATGTTGATGATGAAATGGTTAATTGGGAAGTGGAAGGCCTAAAATTCTTTGTTAAACAACCGATTGAGGCAGCTGTAACGAAGGATGAGCTTCAGCACCTCACTTTTCTGTGCAAATCTGAAATTGATTCAGTCGGCAGAATAACTGCTGGAATTTTACGGCTTCTTAAGCTAGAAGGTTCTGTTGGTCAGTCTGTAATAGAACAGCTTGGCAACCTAGGAAGCGAAGGCATCGACAAGTTTTTCTCTTCTGAAAAGGTTGTCAGAGATGGTAGTGTTAGTAGCAGAGGACTTTCTCCCTTGCCAAACCTCACAAAAGAAGAATCACAAAAAACCATGGAGCAAACATTAACTTCGCTTGATGAAGCAATTTTGGATTCACAGGCAAAACTTAATGAACTAACCACTTACATTGGTACTTCGGAGTCTTCTTCCTCTCAGCACCTTACCATTGTCAAACTGAGTCAGAAAATTGAGACAATGCAGGGCTTACTGATGCAATTGCGGAACCAACTTTAA 3648 0.429 MESILARALEYTLKYWLKSFSRDQFKLQGRTLHLSNLDIDGDVLHSSLGLPPALNVATAKVGKLEITLPSVSNVQAEPIIVQIDRLDLVLEENADFDASVSPNSTTPSAASSKGSGYGFADKIADGMTIQIHTVNLLLETRGGARRKGGATWTPPLASITIRNLSLYTTNESWQVVNLKEAREFSSNKKYIYVFKKLEWESLSIDLLPHPDMFMDATSGRSQEGSNLRDDDGAKRVFFGGERFIEGISGEAYITLQRTELNSPLGLEVQLHINEAVCPALSEPGLRALLRFMTGLYVCLNRGDVDLKAQQRSTEAAGRSLVSIVVDHIFLCIKDTEFQLELLMQSLLFSRASVSEGDSDNNLTRITIGGLFLRDTFSSPPCTLVQPSMQAVTKDAFHVPEFARSFCPPIYPLGEQQWQLIEGTPLICLHALQIVPSPLPPSFASQTVINCQPLMIHLQEETCLRISSFLADGIVVNPGDILPDFSIKSFMFTLKGLDLTVPLDKVEFDISKNEMENTTIQTSFTGAKLHIESLFFLDSPSLKLRMLNLEKDPACFSLWEGQPVDASQKKWTARASQLTLSLEACHGTTGRQNSLGQTAGLWRCVDLKDACIEVAMATADGSPLLKVPPPEGIVRVGVACEQYLSNTSVEQLFFVLGLYDYFGRVSEKIAMAGKRKQLEDSRDKSFSGKLMDKVPSDTAVSLTVRDLQLRFLEPSSMNVEGMPLVQFIGDDLFISATHRTLGGAIVVSSTLRWESIEIDCVDAEGHLPCENGSFLSPSKNVPSPSDNGYPQLRAVFWVHKNKKHPINGNALSVPFLDISMVHVIPLLEQDTESHSLNVSASVSGVRLGGGMNYTEALLHRFGILGPDGGPGTGLCKGLENLQKGPLSKLFKTTPLVDNSENVESMSDGKDASFQHLKKPDDVDVTIELRDWLFALEGAQQMAEQWWFSSLGDLDREEKCWHTTFRGLRVNAKTRPKNVLDGKALHRIKQNPIELVTVGVEGLRILKPHTQNHIPSSTLIANGDKEYANTAEGVGLEVRLILCEDNVDDEMVNWEVEGLKFFVKQPIEAAVTKDELQHLTFLCKSEIDSVGRITAGILRLLKLEGSVGQSVIEQLGNLGSEGIDKFFSSEKVVRDGSVSSRGLSPLPNLTKEESQKTMEQTLTSLDEAILDSQAKLNELTTYIGTSESSSSQHLTIVKLSQKIETMQGLLMQLRNQL* 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2314 1215 Coils Coil 1194 1214 - -
Aev10g2314 1215 Pfam N-terminal region of Chorein or VPS13 1 97 IPR026854 -
Aev10g2314 1215 PANTHER UNCHARACTERIZED 1 1214 IPR026728 -
Aev10g2314 1215 PANTHER AMINO-TERMINAL REGION OF CHOREIN, A TM VESICLE-MEDIATED SORTER 1 1214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2314 Aev-Chr10 23060279 23068093 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2314 - - gmx:100803142 1973.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2314 10 23060279 23068093 Aev10g2314 10 23060279 23068093 ECH