Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2142 ATGGGAGTTGCCATTGAAGAAGACCCAAGCCCGAAGCCCATCGTGATCCGCGAGGTGTGGGCCTCCAACATCGAATCAGAATTCCAATTGATCAGTGACCTCATCGACCGCTACCCATTCATCTCAATGGATACGGAGTTCCCTGGAGTCATCTTCCGCCCCCAAACCCCTGATCCATCCAAGCCTTACCTCAGCCGCCACCTCAGCCCCTCCGACCACTACCTCTTCCTCAAATCCAACGTCGACGCCCTCAACCTTATCCAGGTCGGCCTCACCCTCTCCGACGAGCACGGCAACCTCCCTGATCTCGGAACCCCCAACCGTTTCATCTGGGAGTTCAACTTCAGCGACTTCGATCCCGCGCGTGACGCCCACGCTCCTGACTCAATTGACCTCCTCCGCCGTCAGGGAATCGATTTCCGCCGCAACGCCGCCGACGGGATCGACTCGCAGCGGTTCGCGGAGCTGATGATGTCGTCGGGGCTGGTGTGCAACGATGCGGTGAGCTGGGTAACGTTCCACAGCGCGTATGATTTCGGGTATTTGGTAAAGATCCTGACCCGAAGGAACCTGCCCGGCGGATTGGAAGAGTTTTTGCGGGTTCTGAGGGCGTTCTTCGGGGAGAACGTGTACGACGTGAAGCATATGATGCGTTTCTGCAAGGCCCTGTACGGTGGCCTGGATCGGGTCGCTCGGACCCTCAATGTGGACCGGGCCGTTGGGAAGTGCCACCAGGCCGGCTCCGATAGTTTGCTGACGTGGCACGCGTTTCAGAGGATGAGGGACGTTTACTTCCTCAAGGATGGGCCCCAGAAGCACGCCGGCGTTTTGTTTGGACTTGAGATGCAGAGATGTACTGTCAATTGA 867 0.5802 MGVAIEEDPSPKPIVIREVWASNIESEFQLISDLIDRYPFISMDTEFPGVIFRPQTPDPSKPYLSRHLSPSDHYLFLKSNVDALNLIQVGLTLSDEHGNLPDLGTPNRFIWEFNFSDFDPARDAHAPDSIDLLRRQGIDFRRNAADGIDSQRFAELMMSSGLVCNDAVSWVTFHSAYDFGYLVKILTRRNLPGGLEEFLRVLRAFFGENVYDVKHMMRFCKALYGGLDRVARTLNVDRAVGKCHQAGSDSLLTWHAFQRMRDVYFLKDGPQKHAGVLFGLEMQRCTVN* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2142 288 SUPERFAMILY Ribonuclease H-like 15 279 IPR012337 -
Aev10g2142 288 Pfam CAF1 family ribonuclease 19 148 IPR006941 -
Aev10g2142 288 Gene3D - 4 284 IPR036397 GO:0003676
Aev10g2142 288 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 13 282 IPR039637 GO:0004535|GO:0030014
Aev10g2142 288 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED 13 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2142 Aev-Chr10 22057830 22058696 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2142 K12581 - gmx:100817875 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2142 10 22057830 22058696 Aev10g2142 10 22057830 22058696 ECH
Aev10g2142 10 22057830 22058696 Aev04g2824 04 27995576 27996589 PCT