Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1993 ATGGAAGATGCAGGTCCAAAAGTGTTCATCCCGGACTCGATCCAGGGCGTGAGTTACGACATAGCAGGGCAGATTCAGATGATATGGGAGGTGATAAAGGCGCCATTGATAGTGCCCATTTTGAAGCTCGGCGTGATCATATGCCTGGTGATGTCACTGATGCTGTTCATGGAGAGGCTGTACATGGGTATCGTCATCATTCTTGTGAAGCTGTTCTGGAAGAAGCCAGAGAAGCGATACAACTATGAGCCCATCCAGGACGATGTGGAGCAGGGGAGCTCTAACTTCCCCATTGTCCTCATCCAAATCCCAATGTTCAATGAGAGAGAGGTTTACAAGGTGTCGATTGGAGCAGCTTGTAATCTTTCATGGCCAGCTGACCGGCTCGTGATCCAAGTGCTTGATGATTCCACTGACCCTACCATTAAGCAAATGGTGGAGATGGAGTGCCAGAGATGGGCGAGCAAAGGGATAAACATAACGTATCAAATAAGAGAGACGAGAGGGGGATACAAAGCCGGTGCACTCAAAGAAGGCCTGAAGAGGAGCTACGTCAAGCACTGCGAGTACGTTGCCATCTTCGACGCCGATTTCAGGCCTGAGCCTGACTTTCTCCGCCGTGCCGTTCCCTTCTTGGTTGGCAACCCTGAAATTGCTCTTGTTCAAGCTCGCTGGAGATTTGTGAATGCTGATGAGTGTTTGCTGACAAGAATGCAAGAGATGTCACTGGATTACCATTTCACAGTGGAGCAAGAAGTTGGTTCTGCCACTCATGCTTTCTTTGGTTTCAATGGCACAGCAGGTATTTGGAGAATTGCCGCAATCAATGAAGCAGGAGGGTGGAAAGACAGAACAACGGTGGAGGACATGGATCTTGCTGTTCGTGCCAGCCTTAGGGGATGGAAATTCTTGTACCTTGGAGATCTTCAGGCAAAAAGTGAGCTTCCAAGTACTCTCAGAGCTTTCCGCTTCCAGCAACATCGATGGTCTTGTGGTCCTGCTAATCTGTTCCGCAAAATGGTGATGGAGATTGTGAGGAACAAGAAAGTGAAATTCTGGAAGAAAGTGTATGTTATATACAGTTTCTTCTTTGTTCGCAAGATCATAGCTCACATGGTCACCTTCATCTTCTACTGTGTGGTGCTTCCACTCACAATTTTGGTTCCTGAGGTTCATGTCCCTATTTGGGGAGCTGTTTACATTCCCTCCATCATCACCATCCTCAATTCAGTTGGAACACCAAGGTCCATTCACCTATTGTTCTATTGGATCCTATTTGAGAATGTGATGTCACTGCACCGTACCAAGGCAACATTCATAGGTCTGCTAGAAGCAGGGAGAGCCAATGAGTGGGTTGTTACTGAAAAACTTGGTGACTCTGTCAATAATAACAAGAATAAAGCCGGAGGAGATGCTTCCAAGAACAAGACCAATGTCACAAAAACAGTCAAGAAAACTCGATCCAAATTTGTGGAAAGACTTAATATGTTGGAGCTTGGATTTGCTGTCTTCCTCTTCCTCTGTGGATGCTATGACTTTGTGCATGGGAAGAACAACTACTTTGTGTACCTATTCCTTCAGACCATAACCTTCTCAATTGTAGGATTTGGTTATGTTGGTACCATTGTCTAA 1632 0.4614 MEDAGPKVFIPDSIQGVSYDIAGQIQMIWEVIKAPLIVPILKLGVIICLVMSLMLFMERLYMGIVIILVKLFWKKPEKRYNYEPIQDDVEQGSSNFPIVLIQIPMFNEREVYKVSIGAACNLSWPADRLVIQVLDDSTDPTIKQMVEMECQRWASKGINITYQIRETRGGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDFLRRAVPFLVGNPEIALVQARWRFVNADECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGIWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFIFYCVVLPLTILVPEVHVPIWGAVYIPSIITILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEAGRANEWVVTEKLGDSVNNNKNKAGGDASKNKTNVTKTVKKTRSKFVERLNMLELGFAVFLFLCGCYDFVHGKNNYFVYLFLQTITFSIVGFGYVGTIV* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1993 543 PANTHER - 1 543 - -
Aev10g1993 543 Pfam Glycosyl transferase family group 2 190 397 IPR001173 -
Aev10g1993 543 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 88 316 IPR029044 -
Aev10g1993 543 PANTHER BNAC09G36340D PROTEIN 1 543 - -
Aev10g1993 543 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 378 IPR029044 -
Aev10g1993 543 CDD CESA_CaSu_A2 97 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1993 Aev-Chr10 21161856 21166144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1993 1 543 Miscellaneous Gene Families AT5G22740 80.479 0.0 916
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1993 K13680 - gmx:100802752 998.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1993 10 21161856 21166144 Aev10g1993 10 21161856 21166144 ECH
Aev10g1993 10 21161856 21166144 Aev04g2897 04 28756030 28763461 ECH