Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1880 ATGAGAACGAGCAACCACTTGATCGGTCTATTAAACTTCCTAACGTTCTTACTGTCAGTGCCAATCCTGGGCGGCGGAATATGGCTGAGCAGCAGAGCCAACAACACGGACTGCCTCAAGTTCCTACAGTGGCCACTAATCATCATCGGCGTCTCCATCATGGTCATCTCCCTTGCGGGTTTCGCCGGCGCGTGTTACCGCAACACCTTCCTCATGCGCCTCTACCTCGTCGCCATGTTCTTCATCATCGCTCTCCTCATCGCCTTCATCGTCTTCGCCTACGTTGTCACCGACAAGGGGTCGGGTCGGGTCGTGCCTAACAGGGCTTACTTGGATTATTACCTGCAGGACTATTCGGGTTGGTTGGAGGAGCGCGTGGCGAGTGATAGCTATTGGGGCAAGATAAGCTCTTGTATTAGGGACTCTAAGGTTTGTGCTAAGCTTGGAACAACAACTGCAACAACATCAACACTTGCTGCTGCTGATATGTTCTACCTCAGAAAACTCTCTCCTATTCAGTCTGGTTGCTGCAAGCCCCCAACAGAATGTGGTTATGTGTATGAGAACGAGACAATGTGGAATCCTGGAGCAGGAATGGTTGGGAGCAACGCAGATTGCACAAGGTGGAGCAATGACCAAAGCATGCTCTGCTATTCGTGCGACTCTTGCAAGGCTGGCGTGCTGGCTAGCCTCAAGAAGAGCTGGAGGAAGGTGTCTGTGATCAACATTGTCGTGATGATCATCCTGGTCATCCTCTATGTCATTGCTTATGCTGCTTATAGGAACAACCGCAGGATGGATAATGATGAGCCCTATGGTGAAGCAAGGATGACCAAGGCTCACCCTACCAGAATTCACCTCTAG 864 0.5093 MRTSNHLIGLLNFLTFLLSVPILGGGIWLSSRANNTDCLKFLQWPLIIIGVSIMVISLAGFAGACYRNTFLMRLYLVAMFFIIALLIAFIVFAYVVTDKGSGRVVPNRAYLDYYLQDYSGWLEERVASDSYWGKISSCIRDSKVCAKLGTTTATTSTLAAADMFYLRKLSPIQSGCCKPPTECGYVYENETMWNPGAGMVGSNADCTRWSNDQSMLCYSCDSCKAGVLASLKKSWRKVSVINIVVMIILVILYVIAYAAYRNNRRMDNDEPYGEARMTKAHPTRIHL* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1880 287 PANTHER TETRASPANIN-8-RELATED 1 281 IPR044991 GO:0009734|GO:0016021
Aev10g1880 287 Pfam Tetraspanin family 6 256 IPR018499 GO:0016021
Aev10g1880 287 PANTHER TETRASPANIN-3-LIKE 1 281 - -
Aev10g1880 287 PRINTS Transmembrane four family signature 66 94 - -
Aev10g1880 287 PRINTS Transmembrane four family signature 39 65 - -
Aev10g1880 287 PRINTS Transmembrane four family signature 6 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1880 Aev-Chr10 20345629 20349502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1880 1 279 Miscellaneous Gene Families AT5G60220 71.326 1.18e-126 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1880 - - gmx:100798336 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1880 10 20345629 20349502 Aev10g1880 10 20345629 20349502 ECH
Aev10g1880 10 20345629 20349502 Aev04g3045 04 30186919 30193654 PCT