Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1661 ATGGCGAATGGTGACATATCTTGTTCCACTCAGCTAATTGATGGAGATGGTAATTTCAATGTTGGTGGGATTGATAACTTCATGAAGGAGGTTAAATTAGCTGAATGTGGTCTTTCCTATGCCGTAGTTTCTATTATGGGTCCACAAAGCAGTGGCAAGAGTACACTATTAAATAATTTGTTTCGTACCAACTTCAGAGAGATGGATGCATTTAAAGGAAGGTCTCAAACAACCAAAGGTATTTGGATGGCAAGATGTGCCGGCATAGAGCCTTGTACACTTGTGATGGATTTAGAGGGTACTGATGGAAGAGAGCGTGGAGAGGATGATACTGCATTTGAAAAGCAGAGTGCACTTTTTGCTTTGGCTGTTTCAGATATAGTGCTAATAAACATGTGGTGTCATGACATTGGCCGTGAACAAGCTGCAAACAAGCCACTTCTAAAAACTGTGTTTCAGGTCATGATGAGATTGTTTAGTCCACGCAAAACAACATTAATGTTTGTCATTCGTGATAAAACAAGGACACCGCTTGAAAATTTAGAACCTGTTTTGCGAGAAGATATTCAAAAGATTTGGGACTCTGTTCCGAAACCACAGGCCCACAAAGAAACCCCACTAAGTGAATTTTTTAACGTTGAAGTTGTTGCCCTTTCTAGTTTTGAAGAAAAGGAAGAGCAATTTAGGGAGCAGGTTGCCAGCTTGAGGCAACGATTTTATCAATCAATAGCTCCTGGTGGGCTTGCTGGGGATCGGCGTGGAGTAGTTCCTGCTTCGGGCTTTTCTTTTAGTTCTCAGCAAATTTGGAAAGTCATTAAAGAGAACAAGGATCTTGACCTTCCTGCTCACAAGGTCATGGTTGCCACTGTAAGATGTGAAGAAATTGCCAATGAGAAATATGCCCTTTTTGCTGCAAATAAGGATTGGTGTCAGTTGGAAGAGGCTGTGCAATCTGGCCCGGTTGCTGGATTTGGGAAAAGACTCAATTCACTCCTTGTTGCTTGTTTTTCAGAGTATGATGTTGAAGCCACTTATTTTGATGAAGGTGTGAGATCTGCAAAACAAAAGCAGCTTCAAGAAAAGTTGTTTCAACTTGTCCAACCAGCATTCCAATCTGCCCTGGGACATGTAAGGTCTGGAACTTTCAATAAGTTCAAGGAAGCATTTGACAAGGCTTTGAATAGAGGAGAAGGGTTTTCTGCCGCTGCTCATGATTGCATAGGGTCCTGTATGGCTCAGTTTGATGAAGCATGTGCAGATGTTGTTGTTGAAGTAGCAGACTGGGATACATCTAAAGTAAGGGAGAAACTCCAGCGTGACATTGATGGACATATTGCATCTGTCCGTGCAACTAAGATGTCGGAACTAACTTCATCATATGAGGAAAAACTGAAGGAAGCCTTGTCTGGACCTGTTGAAGCTCTTTTGGATGCAGCTAATAGTGAAACATGGCCATCAGTAAGGAACCTTCTTAGGCGTGAGACTGAATCAGCTGTTTCTGAGTTTTCTGCTGCGCTTAGCAGATTTGATACGGATGAACAAACACAAATGAACACGATTGTGAGTTTAAAGGATTATGCAAGGGGTCTAATAGAGGCAAAGGCTAGGGAAGAAGCTGGCAGAGTTCTAATCCGTATGAAAGACAAGTTTACAACATTGTTTAGTCATGATTCTGATTCAATGCCTCGTATTTGGACGGGAAAAGAAGATATTCGATCCATCACCAAGACTGCCCGCTCTGCTTCCTTGAAGTTGCTATCTATTATGGCTGTAATTCGTTTGGAAGATGGTGATGATGCTTTTAACATCGAGAAAACTTTATCGGTTGCATTGATGGATTCACCCAGCAATGTTAAAGATAGGAGAATCACGGCAGTTGATCCACTGGCTTCGAGCACTTGGGAAAAGGTTCCATCCTCTAAAACATTGATCACACCTGTCCAGTGCAAATCTTTATGGAGGCAATTCAAGATTGAGACAGAATACAGTGTTTCCCAGGCCATTTCTGCACAGGAGGCCAACAAGCGTAATAACAACTGGTTACCACCACCATGGGCGATTATTGCCTTGATTATTCTGGGATTTAATGAATTTATGACACTTCTTAGAAATCCCTTGTATTTGGGTCTGATCTTTATTGGTTATCTTCTCGTTAAAGCCTTATGGGTGCAGCTTGACGTTAAAAGTCAATTCCGCCATGGAGCACTTCCGGGAATCATATCCTTGTCTAGCAAGTTTGTTCCAACTATCATGAATCTTATGAGAAAGCTAGCAGAGGAGGGACAGAATCCTGCAACTAACAACCCTCAGAGAAATCCACCAAGTAATCAAAACACTGTTACTGCTGGTAGCATCACATCATCTAGTGCTTCGTCTAATGTAACTTCATTGGACAAAGGATCCGAGTACACCAGTCCATCGAAAGATGATTAG 2433 0.4192 MANGDISCSTQLIDGDGNFNVGGIDNFMKEVKLAECGLSYAVVSIMGPQSSGKSTLLNNLFRTNFREMDAFKGRSQTTKGIWMARCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVALSSFEEKEEQFREQVASLRQRFYQSIAPGGLAGDRRGVVPASGFSFSSQQIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYALFAANKDWCQLEEAVQSGPVAGFGKRLNSLLVACFSEYDVEATYFDEGVRSAKQKQLQEKLFQLVQPAFQSALGHVRSGTFNKFKEAFDKALNRGEGFSAAAHDCIGSCMAQFDEACADVVVEVADWDTSKVREKLQRDIDGHIASVRATKMSELTSSYEEKLKEALSGPVEALLDAANSETWPSVRNLLRRETESAVSEFSAALSRFDTDEQTQMNTIVSLKDYARGLIEAKAREEAGRVLIRMKDKFTTLFSHDSDSMPRIWTGKEDIRSITKTARSASLKLLSIMAVIRLEDGDDAFNIEKTLSVALMDSPSNVKDRRITAVDPLASSTWEKVPSSKTLITPVQCKSLWRQFKIETEYSVSQAISAQEANKRNNNWLPPPWAIIALIILGFNEFMTLLRNPLYLGLIFIGYLLVKALWVQLDVKSQFRHGALPGIISLSSKFVPTIMNLMRKLAEEGQNPATNNPQRNPPSNQNTVTAGSITSSSASSNVTSLDKGSEYTSPSKDD* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1661 810 MobiDBLite consensus disorder prediction 762 810 - -
Aev10g1661 810 Coils Coil 218 238 - -
Aev10g1661 810 Pfam Sey1 three-helix bundle domain 323 760 IPR046758 -
Aev10g1661 810 PANTHER PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 7 793 - -
Aev10g1661 810 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 275 IPR027417 -
Aev10g1661 810 Hamap Protein SEY1 [SEY1]. 9 762 IPR008803 -
Aev10g1661 810 CDD GBP 36 242 - -
Aev10g1661 810 MobiDBLite consensus disorder prediction 762 802 - -
Aev10g1661 810 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 46 281 - -
Aev10g1661 810 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 37 252 IPR030386 GO:0005525
Aev10g1661 810 PANTHER PROTEIN SEY1 7 793 IPR008803 -
Aev10g1661 810 Gene3D - 26 250 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1661 Aev-Chr10 19002345 19009688 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1661 K22698 - gmx:100777656 1336.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1661 10 19002345 19009688 Aev09g0687 09 6288410 6300471 PCT