Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1616 ATGGACAGAAACTATTCCCGCAGGCAAGTTGCTGCTATGAAACAGTCCCTCTTTGATCAGGGGTATCTTGATGAACAATTCATCCAACTGGAAGAATTGCAGGATGATGCCAACCCTAACTTTGTTGAGGAAATTGTGACTCTTTACTACCGTGATTCATCCAGGCTTATATCCAACATGGAGCATGCACTGGAGAGAAAACCACTGGATTTCAACAGGCTAGACTCAATTATGCATCAGTTTAAAGGAAGCAGCTCAAGCATTGGAGCCAAAAAGGTGAAAGCAGAATGCACTCTGTTTAGGGAATACTGCAAGTCAGGAAATGCTGAAGGATGCATGAAGAGCTTCCAACAATTGAAGAGAGAATATGCAGTACTGAGAAAGAAGCTTGAAGCATATTTTCAGCTTTCTAGGCAAGCTGGGCCCATGGAGACAGCATGCCGCCCCAAGCCTTTTCCTCCCCAATCTTCGTTTGGTCCTCCACCAAGTCAAAGTCAAAACCCTGCTGGTGTTGGAGTTGCACCTCCACAGCCCCAACAGCGAGGGAGTCAGTATAAGCAGAATCGGAATTATGGTGGAGGAGATGGAGGAGCTGTCACTTCTTCAGTTCCCTCTGCTTCATTCCCACAAGGTTACTCCCAAAGGCCTCCAAATTCTGGCTATCATCATGCTGGATATGGATCATCAACTTCACACCATTATCAGCAGTATCCACCACCACCACCACCACCTGAAACTTCATACCCTGCTCCACCACCACCGCCGCCGCCACCACCTTCAATGCCTCAAGAAAATTTGCAGCCTCGTCATGCTCCTCCAACGTACTATCCTTCTAATAATTACTCTCAGTACAACCAGCTGCCAGCGCAGCCACCAATGCAGCCACCACCACCACCTCCTCCACCTCCTTCTTCACCGCCACCAAGTTCTTCTATCCCCCCTCCACCTCCCCCTAGCTCACCACCTCCTGCTTCAGCTCCTCAGCCAGGTCAAAAGAATGGGGAAAGACAATCACATGATCGCAATAAAGGGTCTGCAAGACGTGGACATGAGCATTCCAATCATGGGGTTCCTCATAAACAGCAGAAGCCTGCTGTTCCTCCAATGCCGGTGAAGAAATCAAATGGGCCTCCTGGGAGGGCTGAGTCAGAGGAGGAAAGAAGGTTGAGAAAAAAGAGAGAATTTGAGAAGCAAAGGCAAGAGGAAAAACATAGACAGCAGCTGAAGGTATCCCAGAATAGTGTTCTGCAAAAGACTCAGATGTTATCATCTGGGAAGGGGCATGGTTCAGTGGTAGGTTCACGGATGGGAGAAAAGAAAACTGTTGCTCCCTTATTGAGCGGTGAGAGGATTGAAAACAGGTTGAAGAAGCCCACCACGTTTCTGTGCAAGCTGAAATTCCGAAATGAACTTCCCGATCCAAGTGCACAGCCCAAGCTAATGGCATTCAAGAAAGATAAAGATCAATATTCAAAGTATACAATCTCATCCCTGGAGAAAATGTACAAACCCAAACTTTTTGTGGAGCCTGATCTTGGGATACCTTTAGACCTGCTTGATCTCAGTGTTTACAATCCTCCCAGTGTCAGACCACCTCTTGCACCAGAAGATGAAGAATTGTTGCGAGATGATGTTGTTGTTACTCCTATAAAAAAGGATGGCATAAAAAGAAAAGAAAGGCCTACTGATAAGGGTGTTGCATGGCTTGTCAAAACCCAATATATATCTCCTCTGAGCATGGAATCAACAAAACAGTCTTTAACTGAAAAACAAGCCAAGGAACTGAGAGAGATGAAGGGAGGCCGCAACATTTTGGACAATCTTAACAGCAGGGAAAGGCAAATAAAGGAAATAGAAGCATCATTTGAAGCAGCTAAGTTGCATCCTGTTCATGCAACTAACAAAGATTTGTATCCTGTTGAGGTTCTGCCTTTGCTGCCTGATTTTGATAGGTATGACGATCAGTTTGTTGTTGCTGCATTTGATAATGCTCCTACAGCTGATTCTGAAATCTACACAAAGTTGGACAAATCTTTTCGTGATGCCCATGAATCAAGGGCAATTATGAAAAGCTATGTTGTGTCAGGCTCAGATCCTACAAAACCTGATAAATTTTTGGCATATATGGTCCCAGCACCTGGAGAGACGTCGAAGGATATATATGATGAAAATGAAGAGGTCTCATATTCTTGGGTTCGCGAGTATCATTGGGACGTACGGGGTGATGATGCACATGACCCTACAACGTACTTAGTTTCATTTGACGAGTCAGAGGCACGCTATTTGCCTCTTCCAACAAAGCTTGTTTTAAGAAAAAAGAGAGCTAAAGAGGGAAGATCTGGTGATGAGATTGAACAATTTCCAGCACCTTCAAGAGTCACTGTAAGGCGGAGGGAAAATGTTGCTGCAATTGAGCTGAAGGATTCTGAGGCTTATACAAATACAAAGGGCGTTTCTTCGAAGAGAGGCGGGGGTTTAGAAATGGAAGATGATGACATGGAAGAGCAACATGGAGTTGCATTGCACCAGGATAATTATCACCAGTCTAGTGGAGGGGAAGATGACATATCTGGTTGA 2577 0.4521 MDRNYSRRQVAAMKQSLFDQGYLDEQFIQLEELQDDANPNFVEEIVTLYYRDSSRLISNMEHALERKPLDFNRLDSIMHQFKGSSSSIGAKKVKAECTLFREYCKSGNAEGCMKSFQQLKREYAVLRKKLEAYFQLSRQAGPMETACRPKPFPPQSSFGPPPSQSQNPAGVGVAPPQPQQRGSQYKQNRNYGGGDGGAVTSSVPSASFPQGYSQRPPNSGYHHAGYGSSTSHHYQQYPPPPPPPETSYPAPPPPPPPPPSMPQENLQPRHAPPTYYPSNNYSQYNQLPAQPPMQPPPPPPPPPSSPPPSSSIPPPPPPSSPPPASAPQPGQKNGERQSHDRNKGSARRGHEHSNHGVPHKQQKPAVPPMPVKKSNGPPGRAESEEERRLRKKREFEKQRQEEKHRQQLKVSQNSVLQKTQMLSSGKGHGSVVGSRMGEKKTVAPLLSGERIENRLKKPTTFLCKLKFRNELPDPSAQPKLMAFKKDKDQYSKYTISSLEKMYKPKLFVEPDLGIPLDLLDLSVYNPPSVRPPLAPEDEELLRDDVVVTPIKKDGIKRKERPTDKGVAWLVKTQYISPLSMESTKQSLTEKQAKELREMKGGRNILDNLNSRERQIKEIEASFEAAKLHPVHATNKDLYPVEVLPLLPDFDRYDDQFVVAAFDNAPTADSEIYTKLDKSFRDAHESRAIMKSYVVSGSDPTKPDKFLAYMVPAPGETSKDIYDENEEVSYSWVREYHWDVRGDDAHDPTTYLVSFDESEARYLPLPTKLVLRKKRAKEGRSGDEIEQFPAPSRVTVRRRENVAAIELKDSEAYTNTKGVSSKRGGGLEMEDDDMEEQHGVALHQDNYHQSSGGEDDISG* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1616 858 MobiDBLite consensus disorder prediction 409 427 - -
Aev10g1616 858 MobiDBLite consensus disorder prediction 334 358 - -
Aev10g1616 858 PRINTS Proline rich extensin signature 231 252 - -
Aev10g1616 858 PRINTS Proline rich extensin signature 269 286 - -
Aev10g1616 858 PRINTS Proline rich extensin signature 146 162 - -
Aev10g1616 858 PRINTS Proline rich extensin signature 252 268 - -
Aev10g1616 858 PRINTS Proline rich extensin signature 288 313 - -
Aev10g1616 858 MobiDBLite consensus disorder prediction 143 437 - -
Aev10g1616 858 MobiDBLite consensus disorder prediction 162 190 - -
Aev10g1616 858 MobiDBLite consensus disorder prediction 200 234 - -
Aev10g1616 858 Pfam Paf1 461 844 IPR007133 GO:0006368|GO:0016570|GO:0016593
Aev10g1616 858 Coils Coil 381 401 - -
Aev10g1616 858 MobiDBLite consensus disorder prediction 235 266 - -
Aev10g1616 858 MobiDBLite consensus disorder prediction 147 161 - -
Aev10g1616 858 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 133 IPR008207 GO:0000160
Aev10g1616 858 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 7 139 IPR036641 GO:0000160
Aev10g1616 858 Coils Coil 116 136 - -
Aev10g1616 858 SUPERFAMILY Formin homology 2 domain (FH2 domain) 298 555 - -
Aev10g1616 858 MobiDBLite consensus disorder prediction 842 858 - -
Aev10g1616 858 Gene3D HPT domain 1 146 IPR036641 GO:0000160
Aev10g1616 858 MobiDBLite consensus disorder prediction 272 288 - -
Aev10g1616 858 PANTHER RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG 299 852 IPR007133 GO:0006368|GO:0016570|GO:0016593
Aev10g1616 858 MobiDBLite consensus disorder prediction 808 858 - -
Aev10g1616 858 Pfam Hpt domain 44 127 IPR008207 GO:0000160
Aev10g1616 858 MobiDBLite consensus disorder prediction 289 328 - -
Aev10g1616 858 MobiDBLite consensus disorder prediction 378 408 - -
Aev10g1616 858 CDD HPT 42 131 IPR008207 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1616 Aev-Chr10 18752573 18760816 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1616 K15174 - gmx:100800148 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1616 10 18752573 18760816 Aev10g1616 10 18752573 18760816 ECH
Aev10g1616 10 18752573 18760816 Aev09g0290 09 2388179 2390706 PCT