Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1565 ATGGCAGTCTCAAAAGATTCCTTATACACCTATCTCCTCCTCCTCCGACCTCATAGCGATATTCTAAACCGCGTAGTGTTCACGCGCCGTTTGCGCGTGACATGCACGGTGGGTCTTCTTCTCTTCCTAACCAGCGTCTACGTTTTATGGCCGTCCGATCCGAGGATGAAGATCGTGGGGCTGAAGCTGAAGCGGATCAAGGTGCACACGTTGCCGCATATCACTGTAGACATCTCCATGCTCCTAACGGTGAGCGTGCACAATGCTGACGTGTACTCTTTGGACTTCGGAGGGGTTGACGTGGCGGTATGGTATAGAGGGAAGAGCCTCGGGCACGTGAGGTCGGAGCATGGGCACGTGAGGGCGAGAGGGTCGTCCTACGTGGAGGCTGACGTGGAATTTGCTGGGATCGGAGTGATGCCTGAGATGGTGCTGTTTCTGGAGGACCTGGCTAAGGGTGTGGTTCCCTTTGATACGGTTAGTCAGGTTAGGGGCCAATTGGGCCTTGCCTTCTTTCACTTCACCATCAAGGCAAAACTATCATGTGAGGTATTGGTGAGTACACTAAACCAGACAATTGTTCGGCAACATTGTCTCCATGAGTGA 606 0.5297 MAVSKDSLYTYLLLLRPHSDILNRVVFTRRLRVTCTVGLLLFLTSVYVLWPSDPRMKIVGLKLKRIKVHTLPHITVDISMLLTVSVHNADVYSLDFGGVDVAVWYRGKSLGHVRSEHGHVRARGSSYVEADVEFAGIGVMPEMVLFLEDLAKGVVPFDTVSQVRGQLGLAFFHFTIKAKLSCEVLVSTLNQTIVRQHCLHE* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1565 201 Pfam Late embryogenesis abundant protein 83 182 IPR004864 -
Aev10g1565 201 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 24 200 - -
Aev10g1565 201 Gene3D - 51 191 - -
Aev10g1565 201 PANTHER EXPRESSED PROTEIN 24 200 - -
Aev10g1565 201 SUPERFAMILY LEA14-like 39 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1565 Aev-Chr10 18478581 18479978 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1565 - - cam:101505811 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1565 10 18478581 18479978 Aev10g1565 10 18478581 18479978 ECH
Aev10g1565 10 18478581 18479978 Aev09g0223 09 1827391 1830886 PCT