Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1555 ATGCCTCTCAGACTCGAAATCAAGCGAAAGCTTGCACAAAGATCAGAAAGAGTAAAATCTGTGGATCTGCATCCGACAGAACCATGGATTCTGGCAAGTTTATACTCAGGAACTGTCGGTATCTGGAACTACCAATCTCAGACCATGGCCAAATCTTTTGAGGTTACTGAGTTACCAGTTAGGTCAGCCAAGTTTATTGCACGCAAACAGTGGGTTGTTGCTGGAGCAGATGATATGTTTATTCGTGTATATAATTACAATACAATGGATAAAATTAAAGTATTTGAGGCACATACCGACTACATTAGGTGTGTGGCTATTCATCCTACACTTCCTTATGTGCTGTCATCATCTGATGATATGCTCATAAAGCTTTGGGATTGGGAAAAAGGCTGGGTTTGTACCCAGATATTTGAGGGTCATTCTCATTATGTCATGCAAGTGACATTCAATCCTAAAGACACAAACACCTTTGCCAGTGCATCTCTTGATCGCACCATAAAGATTTGGAATCTTGGCTCTCCTGATCCTAATTTTACATTGGATGCCCATCAGAAAGGTGTGAATTGTGTTGATTACTTTACAGGTGGTGATAAACCTTATCTAATCACTGGTTCAGATGATCACACTGCCAAGGTATGGGATTATCAGACCAAAAGTTGTGTCCAGACCCTTGAAGGTCACACACACAATGTTTCTGCTGTATGCTTTCACCCTGAACTTCCTATTATCATTACTGGTTCTGAGGATGGTACAGTACGCATATGGCACTCTACAACTTACAGGCTTGAGAATACATTGAACTATGGCCTTGAAAGAGTTTGGGCTGTTGGGTATTTGAAGGGTTCTCGTCGGGTTGTGATTGGCTATGATGAAGGGACTATAATGGTAAAACTTGGCCGAGAAGTACCTGTGGCTAGCATGGACAACAGTGGGAAAATCATATGGGCTAAGCATAATGAAATTCAGACTGTCAATATAAAGAGTGTAGGAGCTGATGTGGAGGTTGCTGATGGAGAAAGGTTACCCTTGGCTGTTAAGGAGCTGGGAACTTGTGATCTCTACCCACAAAATTTAAAGCACAATCCAAATGGGAGGTTTGTTGTTGTATGTGGTGATGGTGAGTATATTATATACACTGCATTGGCTTGGAGAAATAGGTCTTTTGGTTCAGCTCTGGAATTTGTTTGGTCTTCGGATGGAGAGTATGCTGTCAGAGAAAGTACATCAAAGATTAAAATCTTCAACAAAAATTTCCAGGAAAAGAGGAGTGTCCGACCAACATTTTCAGCGGAACGAATATTCGGTGGCACTTTACTGGCAATGTGCTCAAATGATTTCATCTGCTTTTATGATTGGGCAGAATGCAGGTTGATTTATCGCATTGATGTCAATGTGAAAAACCTCTACTGGGCTGATAGTGGCGATCTTGTAACAATTGCTAGTGATACATCATTCTACATCCTGAAATACAATCGTGATATTGTTGCCTCACATTTAGTAAGTGGAAGACCTGTAGATGAGGAAGGTGTTGAAGATGCCTTTGAGCTTCTTCATGAGATGACTGAACGCGTTAGGACAGGTATCTGGGTTGGGGACTGTTTTATCTACAACAATTCCTCTTGGAGGCTTAATTACTGTGTTGGTGGTGAGGTGACGACAATGTTTCATTTGGACCGCCCAATGTATTTGTTGGGGTACCTTGCAAACCAAAGTCGGGTTTATTTGATTGACAAAGAGTTTAATGTCATGGGATACACACTACTTTTAAGCCTGATTGAGTACAAGACATTAGTGATGCGTGGTGATTTAGAAAGGGCTAATGAAGTGTTACCATCAATTCCTAAAGAGCATCTTAACAGTGTGGCTCGTTTCCTGGAATCACGAGGCATGATAGAGGATGCTCTTGAAGTAGCTACTGACCCTGACTACAGATTTGACCTAGCAATACAGCTTGGTAGATTAGATGTTGCAAAGAGTATTGCACTAGAAGTTCAGAGTGAGTCTAAATGGAAGCAGTTGGGAGAATTAGCTATGTCTGCTGGAAAGTTAGATATGGCTGAGGCATGTTTAAATCATGCAATGGATTTGAGTGGGTTGTTACTGCTGTATTCTTCTTTGGGAGATGCAGAAGGGATATCAAAACTGGCAACCCTTGCTAAGGAGCAAGGGAAGAATAATGTTGCTTTCCTTTGCTTATTTATGTTGGGTAGACTTGAAGACTGCCTTCAACTGTTGGTAGAAAGCAATCGGATTCCAGAGGCAGCTTTAATGGCTCGATCTTATCTCCCAAGCAAGGTATCAGAGATAGTGGCAATTTGGAGAAAAGATCTAAATAAGGTTAATCCAAAAGCTGCTGAGTCATTGGCTGATCCTGAAGAATATCCTAATTTATTTGAAGATTGGCAAGTTGCACTTGCTGTTGAATCAAAGGCTGTAGAAACAAGGAATGTTTACCCTCCTGCAGAGCAGTACATCAACCATGCTGATAAATCACACATTACCCTTGTTGAAGCTTTCAGAAACATGCAGATAGAAGAAGAAGAGGAGGAGCCTCTAGAGAATGGGGACTCTAATCATGAGTTGGCTGAACAGAATGGAGAAGAGCACTATACAGAGGCACAGGAGGAGCAAAATGGAGAGGAAGGAAGCCAGGAAGAGGCAGTTGTAGTGGATGCGGATTCTACAGATGGTGCAGTACTCGTTAATGGTAACGAGGCTGACGAAGAGTGGGGTCCAATCAAGACAGTCGGTTCCAGCTTCTGGGATATTTATCTGAGGTCTCCTCACGGAGCCATGATGAGATTATGCGGACTGGTTGTTTCTGTTTCCTGGTGCTGTGGTTTTGTAGTGCCCTGA 2859 0.4208 MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVGIWNYQSQTMAKSFEVTELPVRSAKFIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHTDYIRCVAIHPTLPYVLSSSDDMLIKLWDWEKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAVGYLKGSRRVVIGYDEGTIMVKLGREVPVASMDNSGKIIWAKHNEIQTVNIKSVGADVEVADGERLPLAVKELGTCDLYPQNLKHNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESTSKIKIFNKNFQEKRSVRPTFSAERIFGGTLLAMCSNDFICFYDWAECRLIYRIDVNVKNLYWADSGDLVTIASDTSFYILKYNRDIVASHLVSGRPVDEEGVEDAFELLHEMTERVRTGIWVGDCFIYNNSSWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMRGDLERANEVLPSIPKEHLNSVARFLESRGMIEDALEVATDPDYRFDLAIQLGRLDVAKSIALEVQSESKWKQLGELAMSAGKLDMAEACLNHAMDLSGLLLLYSSLGDAEGISKLATLAKEQGKNNVAFLCLFMLGRLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVESKAVETRNVYPPAEQYINHADKSHITLVEAFRNMQIEEEEEEPLENGDSNHELAEQNGEEHYTEAQEEQNGEEGSQEEAVVVDADSTDGAVLVNGNEADEEWGPIKTVGSSFWDIYLRSPHGAMMRLCGLVVSVSWCCGFVVP* 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1555 952 MobiDBLite consensus disorder prediction 866 888 - -
Aev10g1555 952 PRINTS G protein beta WD-40 repeat signature 202 216 IPR020472 -
Aev10g1555 952 PRINTS G protein beta WD-40 repeat signature 158 172 IPR020472 -
Aev10g1555 952 PRINTS G protein beta WD-40 repeat signature 244 258 IPR020472 -
Aev10g1555 952 SUPERFAMILY WD40 repeat-like 227 492 IPR036322 GO:0005515
Aev10g1555 952 PANTHER COATOMER SUBUNIT BETA' 1 875 - -
Aev10g1555 952 Gene3D - 11 300 IPR015943 GO:0005515
Aev10g1555 952 ProSiteProfiles Trp-Asp (WD) repeats profile. 138 180 IPR001680 GO:0005515
Aev10g1555 952 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 138 172 - -
Aev10g1555 952 ProSiteProfiles Trp-Asp (WD) repeats profile. 225 266 IPR001680 GO:0005515
Aev10g1555 952 ProSiteProfiles Trp-Asp (WD) repeats profile. 181 224 IPR001680 GO:0005515
Aev10g1555 952 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 225 256 - -
Aev10g1555 952 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 95 127 - -
Aev10g1555 952 SMART WD40_4 88 127 IPR001680 GO:0005515
Aev10g1555 952 SMART WD40_4 174 215 IPR001680 GO:0005515
Aev10g1555 952 SMART WD40_4 4 43 IPR001680 GO:0005515
Aev10g1555 952 SMART WD40_4 46 85 IPR001680 GO:0005515
Aev10g1555 952 SMART WD40_4 218 257 IPR001680 GO:0005515
Aev10g1555 952 SMART WD40_4 131 171 IPR001680 GO:0005515
Aev10g1555 952 PANTHER COATOMER 1 875 - -
Aev10g1555 952 CDD WD40 17 297 - -
Aev10g1555 952 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 181 218 - -
Aev10g1555 952 SUPERFAMILY WD40 repeat-like 3 297 IPR036322 GO:0005515
Aev10g1555 952 ProSiteProfiles Trp-Asp (WD) repeats profile. 95 127 IPR001680 GO:0005515
Aev10g1555 952 PIRSF Beta'-COP 2 889 IPR016453 -
Aev10g1555 952 Pfam WD domain, G-beta repeat 133 171 IPR001680 GO:0005515
Aev10g1555 952 Pfam WD domain, G-beta repeat 220 256 IPR001680 GO:0005515
Aev10g1555 952 Pfam WD domain, G-beta repeat 91 127 IPR001680 GO:0005515
Aev10g1555 952 Pfam WD domain, G-beta repeat 177 215 IPR001680 GO:0005515
Aev10g1555 952 Gene3D - 590 798 - -
Aev10g1555 952 Pfam Coatomer WD associated region 319 763 IPR006692 GO:0005198|GO:0006886|GO:0016192|GO:0030117
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1555 Aev-Chr10 18413107 18422675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1555 51 292 Miscellaneous Gene Families AT5G08390 25.806 6.24e-19 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1555 K17302 - gmx:106794271 1762.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1555 10 18413107 18422675 Aev09g0207 09 1730993 1739725 PCT