Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aev10g1524 | ATGTGGCGGAGGCTCATCTCTTCTCAGCTCAAATCCCTAACTGCACTCTCACCTTCTCATTCCCGATCCGCTTCCGCTGCGCTACGATTCACCGCCGCCGCCGCCGCTCCTCCCTCCGCCGCCCTCCTCCTCGCCCGCCACGTCGCCACTCAATCAGCTGGTTCGATCAAAAGGAGGGTTGAGGATGTAGTGCCAATTGCTACCGGACACGAGCGCGAGGAGATTCAGGCTGAGATTGAGGGAAGGGATATTCTTGAAATCAACCGTCCTGAAGGTCCTTTCGGCACAAAGGAAGCACCTGCTGTTGTAAAGTCTGTCTATGACAGAAGGATAGTTGGATGCCCAGGAGGTGAAGGTGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAGGGCAAGCCTTATGAATGTCCAGTGTGCACACAGTATTTTGTGCTTGAAGTGGTGGGACATGGTGGTGATCCTTATGGACACGGCGATCACGGCCACCATTGA | 498 | 0.5462 | MWRRLISSQLKSLTALSPSHSRSASAALRFTAAAAAPPSAALLLARHVATQSAGSIKRRVEDVVPIATGHEREEIQAEIEGRDILEINRPEGPFGTKEAPAVVKSVYDRRIVGCPGGEGEDEHDVVWFWLEKGKPYECPVCTQYFVLEVVGHGGDPYGHGDHGHH* | 166 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aev10g1524 | 165 | Pfam | Cytochrome c oxidase subunit Vb | 67 | 155 | IPR002124 | GO:0005740|GO:0005751|GO:0006123 | |
| Aev10g1524 | 165 | CDD | Cyt_c_Oxidase_Vb | 59 | 151 | IPR002124 | GO:0005740|GO:0005751|GO:0006123 | |
| Aev10g1524 | 165 | PANTHER | CYTOCHROME C OXIDASE SUBUNIT 5B | 1 | 165 | - | - | |
| Aev10g1524 | 165 | Gene3D | Cytochrome c oxidase, subunit Vb | 57 | 152 | IPR036972 | GO:0005740|GO:0005751|GO:0006123 | |
| Aev10g1524 | 165 | SUPERFAMILY | Rubredoxin-like | 56 | 152 | - | - | |
| Aev10g1524 | 165 | ProSiteProfiles | Cytochrome c oxidase subunit Vb, zinc binding domain profile. | 54 | 154 | IPR002124 | GO:0005740|GO:0005751|GO:0006123 | |
| Aev10g1524 | 165 | PANTHER | CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL | 1 | 165 | IPR002124 | GO:0005740|GO:0005751|GO:0006123 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aev10g1524 | Aev-Chr10 | 18191076 | 18193163 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aev10g1524 | K02265 | - | gmx:100801050 | 207.608 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Aev09g0177 | 09 | 1506428 | 1510093 | Aev10g1524 | 10 | 18191076 | 18193163 | ECH | |
| Aev10g1524 | 10 | 18191076 | 18193163 | Aev10g1524 | 10 | 18191076 | 18193163 | ECH | |
| Aev10g1524 | 10 | 18191076 | 18193163 | Aev09g0177 | 09 | 1506428 | 1510093 | PCT |