Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1401 ATGGCAATGAATTTCTTGCAACGCAGGTTCTTCAGCAGCCACCAAATTAGACGAACAACAAATGAGGTGATGAAATTTGCAACAATAAAAAAGAGAGTGTTGGAGCCGTGTGACGTGTTCCTGAATCATAGGTGCAGGGACACGAAGAAAACGGTTGCAACACTCCTATATGACCACCTACGAAGGAACGGTTTCAGCCCTTTTTTGGACAACAAGAACATGAAGCCAGGAGACAAACTTTTCGACAAGATAAACGGTGCCGTTTTGGAGTGCAAGATTGGTGCGGCGGTGTTTTCGCCGAGGTATTGCGAATCTTATTTCTGTCTCCATGAGCTTGCGATGCTTATGGGGTGTAGGAAGAAGGTGATACCGATATTTTGTGATGTGAAGCCTTCTCAATTGCGTGTTGTTAACAATAGAAAGTGGTCGGAGGAAGATATGAGGAGGTTTAGGTGGGCTCTTGAGGAGGCTAAGTGCATAGTTGGACTCACCTTCAATTCCTCAAAAGGGTAA 513 0.4483 MAMNFLQRRFFSSHQIRRTTNEVMKFATIKKRVLEPCDVFLNHRCRDTKKTVATLLYDHLRRNGFSPFLDNKNMKPGDKLFDKINGAVLECKIGAAVFSPRYCESYFCLHELAMLMGCRKKVIPIFCDVKPSQLRVVNNRKWSEEDMRRFRWALEEAKCIVGLTFNSSKG* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1401 170 SMART till_3 36 157 IPR000157 GO:0007165
Aev10g1401 170 Gene3D - 31 170 IPR035897 -
Aev10g1401 170 SUPERFAMILY Toll/Interleukin receptor TIR domain 37 161 IPR035897 -
Aev10g1401 170 ProSiteProfiles TIR domain profile. 35 170 IPR000157 GO:0007165
Aev10g1401 170 PANTHER TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN FAMILY PROTEIN 30 170 - -
Aev10g1401 170 PANTHER COP1-INTERACTING PROTEIN-RELATED 30 170 - -
Aev10g1401 170 Pfam TIR domain 38 135 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1401 Aev-Chr10 17387640 17388152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1401 39 166 Miscellaneous Gene Families AT1G57670 30.556 4.95e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1401 - - adu:107462512 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1401 10 17387640 17388152 Aev10g1401 10 17387640 17388152 ECH