LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev10g1400	ATGGATCCAAGTACTCGTCTTGATCATGCCCTCTTTCAACTCACCCCAACAAGAACAAGATGTGACCTGGTTGTTTTTTCTGGTGGTGTGAATGAAAGACTTGCTTCTGGGCTATTAGAACCTTTTCTTTCTCACCTCAAAAGTGCAAAAGATCAGATTTCAAAAGGTGGCTATTCCATCACTCTTCGTCCTCCTACTACTGTACATGCTCCTTGGTTCACCAAAGCCACCCTCCAAAGGTTTGTTAAATTTGTGAGCACACCAGAAGTTCTAGAGAGGATTGTGACAATAGAAAAGGAGATTGTGCAGATTGAAAATTCGGTTCACTCGAATGAGAAGAGCAATTTTGTGACAGAGACAGAAGATGGGCGTGTCAAAAAGTCAAGTACTAATCAAGATGGACATGAAGAAAATCCCAGGATTCGGCTTCAACGTGTTCTGGACAATCGGAAAGCTATGCTTTGCAAGGAGCAAGCAATGGCCTATGCGCGTGCTTTGGTCGCCGGATATTATCCAGATTTCCTGGATGATCTTATATGTTTCGCCGATGCTTTTGGAGCTTCACGTTTAAGGGAAGCATGCATCAATTTCTTAGACCTATGCAAACAAAAGAATGAAGACAAGCTCTGGATGGATGAGATAGCAGCAATGCAGGCGTCTTCCCAAGCCGTATTGCCTTACCTGCGAACATCCGGAATCATACTTGCCGGCGAAGATGATTCCGCCAGTAAACTAAATGGAATTGATGCTTCTGAATCAACCCCTAGTCATGCAAGCTTTGACATGAGTCAAGATAATAACATGCCACCATTAGCTCAGACACCACCACCAGATGGAAGGGGTCAAATACAAATGTCTTGGCCAAATCATATTCCTTACTATATGCATAATTTTCAAGGTCATGCATTTCAATCTATGGCGCCGCCATTCCAAGGATATCTCTATCCTAGTATGCAGGTTCCCTCTTCATACTATCCTCCAGGAAATATGCAATGGCCTCCAAATGTTGAAGACTCAGAAACAGATTATAGTAAATCATCCTTCAAGAAGAAGAAGAAGAAGAATAAACAGTCTCGAGTAGTAGATTGCTCGGAAGAAGATGCGTCGACTGCATCCACTGACTCTAGTTATGAGAGTGAGTCTGATGAGCATTCAAGGCAAGGCAAAAAGAAGAAGCATGGAAAGAAGTCATCGAGGAAAGTAGTTATTCGCAACATAAACTATATAACCTCTAAAGGAGATGGTGAAAAGGGTAGTTCATCCAATGATGAAGAGTATATCAATGGTGATTCCTTGAAACGGCAGGTAGAGGAAGCAGTGGAGCCATTGGAGAGAAGGCACACGTCAAGCTCGCGGCGCAATAAGAAACAACATGATGCAGATTCGAATGGTGCAAAAGGCAATGACAACTGGAATGCTTTCCAGAATCTTCTACTGAGAGATGATGAGCCTGATACAGAAAAACAGCCTCCAAAGTTTGAGGAGGATTATATTGTGAATAAGAATCTTGAGGATGGAAGATCAAATGGATTTAACCACAAACAAGAGAATACTAAAACTCGAGTAGTTTCAAATGACTCCTTTATTGTGACAGGGAGAGAATACAATGAGGGTCAAAATCTCAATGGATACTTTAGAGAAGGGAAGGATGCACCTATGAAGAACAAAAATAGCACAAATGATGAGTTGGTGTTTTCTCAAAGGATTGAAGAATCAGGTCACTTTTCTGCATCAAAAGTGTCCGGTTTCGGCCCGGAACCTTCCCTTACTAAACGCCACAAAGAAGAGGATTGGTTCATTATGAATCAATCTGATAAATCAGCAAATGAGGATGGAAGCAAAAGTTTGAGTATGTTGAATGGTGTTTCCATTTCATCATCAGAGAAAAACAGGAAAGACATTTTGGCTGATGACTCCTTTATGATTCAAGCTCGATCATCGGACAACCAATTCAATTCTCAATCAGCAGCAGACTTAAGCTTGGTTTCAGACATTGTTGGTGCTGCTGAATTTCCTAAGAGCACTCAAGAGGTTTCACAGAATAAGACTGCAACTTCAAATCCCCATGAGCCAGATGATCTCTTCATGGTTCTTGACCGTGATTCGGCTGCAGAGCAGAATGCAGCAGCACCTTGGAGTATGGAAATGGATTATGAAAACAACATTTCATTGAATGAAGCAAATAAAAAGAGTTCTGATGTTGAAACAGATAAAAAGCAACCATCTAATGGAGAGGTTGCCAATCCTAAAGCTATTGGAGTGAGGAATGGAAAAGTTCTAAGTAAAGATGCAAAGCCTAAGACTGTAAATGGAGCTCTTGGTAGGAGCAAACTCGATGCCGCGCCAAGAAGCAAAGCAACCCCAGGAAGCAGAACAACAACTATGAAGAGCAAATCTGAGAAGGAAGAAGAAAGTAGGAAGAGGAAGGAGGAGCTACTGATTCAGCGGCAAAAGAGAATTGCTGAAAGAAGTGCCTCTAAGAAGAGTGGTACAGACACAAAAACTTCATTGAATTCTGCAAAGAAAGAAAAGCCGAAGACGGCTCATCCATCAAATGAGGAGGCTAAGAAATTGCATAAACCAGTACTTAAGAATTCCACCATTGATCGCCTCGCAACTGCTCGAGTAACTAAGAAGGTTGAACCAAGTCCAGCAAAATCAGGTCCAACAAAGAAACCATCCTCAAAGCCAAATGGGGTGCCTTTGCCGAAGAAGAAACAAGGCACAAAAGAAGCCAAATCTTCAAGCAAAAAAGAAGATATGAAGCAAGGAAATGGAAAAGTTCTTGTTGGCACTAAGAATGAAATGAAAGCCTCAAAAGTGTTGCCGGTGGACTCTGTTGCAGCAGAGCAATCTGTTGAAACAAACAACAATCATTCTGGTTTGAAAGACAATGGAGATTTCTCCAAGACATCATCAGAGAAAAATGTTAAACATTTGACTTCAGAAAGAGTCGAAATGCACGAAAATGATGTTGTCCAATTCCACAAGGACTCATCTTTGCCAAATCATGATCATGCTAATGGAGAGAAAGTGTCAAGAAGTGATGATAAACCTCAACATGTTACTAGTGTCACCATAAATCCTATAAAGCATCTAATTGTTTCTGCTGTGAATCCAAAGGCTAATCAAGAAATAGATGAAGGTAATGGTGTCTCATTTGAGGTCCCTAAGAAGCAAATCTATACTCCTCCTCCCAATGATCAAGTGATGCCAGAACAAGCTCACTCCAGGAAGAAATGGAACAATGATGAGGACTCTTCGAAAGCGGCGAAAGGTTTTCGCAAACTTCTCTTCTTTGGAAGAAGGAGCTGA	3315	0.4139	MDPSTRLDHALFQLTPTRTRCDLVVFSGGVNERLASGLLEPFLSHLKSAKDQISKGGYSITLRPPTTVHAPWFTKATLQRFVKFVSTPEVLERIVTIEKEIVQIENSVHSNEKSNFVTETEDGRVKKSSTNQDGHEENPRIRLQRVLDNRKAMLCKEQAMAYARALVAGYYPDFLDDLICFADAFGASRLREACINFLDLCKQKNEDKLWMDEIAAMQASSQAVLPYLRTSGIILAGEDDSASKLNGIDASESTPSHASFDMSQDNNMPPLAQTPPPDGRGQIQMSWPNHIPYYMHNFQGHAFQSMAPPFQGYLYPSMQVPSSYYPPGNMQWPPNVEDSETDYSKSSFKKKKKKNKQSRVVDCSEEDASTASTDSSYESESDEHSRQGKKKKHGKKSSRKVVIRNINYITSKGDGEKGSSSNDEEYINGDSLKRQVEEAVEPLERRHTSSSRRNKKQHDADSNGAKGNDNWNAFQNLLLRDDEPDTEKQPPKFEEDYIVNKNLEDGRSNGFNHKQENTKTRVVSNDSFIVTGREYNEGQNLNGYFREGKDAPMKNKNSTNDELVFSQRIEESGHFSASKVSGFGPEPSLTKRHKEEDWFIMNQSDKSANEDGSKSLSMLNGVSISSSEKNRKDILADDSFMIQARSSDNQFNSQSAADLSLVSDIVGAAEFPKSTQEVSQNKTATSNPHEPDDLFMVLDRDSAAEQNAAAPWSMEMDYENNISLNEANKKSSDVETDKKQPSNGEVANPKAIGVRNGKVLSKDAKPKTVNGALGRSKLDAAPRSKATPGSRTTTMKSKSEKEEESRKRKEELLIQRQKRIAERSASKKSGTDTKTSLNSAKKEKPKTAHPSNEEAKKLHKPVLKNSTIDRLATARVTKKVEPSPAKSGPTKKPSSKPNGVPLPKKKQGTKEAKSSSKKEDMKQGNGKVLVGTKNEMKASKVLPVDSVAAEQSVETNNNHSGLKDNGDFSKTSSEKNVKHLTSERVEMHENDVVQFHKDSSLPNHDHANGEKVSRSDDKPQHVTSVTINPIKHLIVSAVNPKANQEIDEGNGVSFEVPKKQIYTPPPNDQVMPEQAHSRKKWNNDEDSSKAAKGFRKLLFFGRRS*	1105

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev10g1400	1104	MobiDBLite	consensus disorder prediction	728	973	-	-
	Aev10g1400	1104	MobiDBLite	consensus disorder prediction	673	688	-	-
	Aev10g1400	1104	MobiDBLite	consensus disorder prediction	115	138	-	-
	Aev10g1400	1104	PANTHER	COP1-INTERACTING PROTEIN-RELATED	1	1104	-	-
	Aev10g1400	1104	MobiDBLite	consensus disorder prediction	837	864	-	-
	Aev10g1400	1104	MobiDBLite	consensus disorder prediction	949	967	-	-
	Aev10g1400	1104	MobiDBLite	consensus disorder prediction	245	285	-	-
	Aev10g1400	1104	MobiDBLite	consensus disorder prediction	1047	1088	-	-
	Aev10g1400	1104	MobiDBLite	consensus disorder prediction	329	470	-	-
	Aev10g1400	1104	MobiDBLite	consensus disorder prediction	906	924	-	-
	Aev10g1400	1104	MobiDBLite	consensus disorder prediction	672	693	-	-
	Aev10g1400	1104	MobiDBLite	consensus disorder prediction	246	269	-	-
	Aev10g1400	1104	MobiDBLite	consensus disorder prediction	795	829	-	-
	Aev10g1400	1104	MobiDBLite	consensus disorder prediction	113	138	-	-
	Aev10g1400	1104	MobiDBLite	consensus disorder prediction	1073	1088	-	-
	Aev10g1400	1104	MobiDBLite	consensus disorder prediction	417	463	-	-
	Aev10g1400	1104	MobiDBLite	consensus disorder prediction	995	1018	-	-
	Aev10g1400	1104	PANTHER	COP1-INTERACTING PROTEIN 7	1	1104	-	-
	Aev10g1400	1104	MobiDBLite	consensus disorder prediction	995	1025	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev10g1400	Aev-Chr10	17375685	17381030	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev10g1400	-		-	gmx:100815598	1365.52

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev10g1400	10	17375685	17381030	Aev10g1400	10	17375685	17381030	ECH