Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1393 ATGGTGGATCGTTTTAGACCTGTTTCAATTGAGGACTTGCCTTCACATTTGATCTTAGAGATTCTATGCTCTGGGAGGCTAAGTGCAATGGACCTTGTTTGTTTGGAATTGACTTCAAAAACCTTTGGTGGTGGTCATGGATTGTATCCTTTCAAGTTTAGGTCATTGGTGGACTTTGCAACATTTCAGTTGTGTTTCTCCCATGTCATCTATTCTAGGATGGCCTTCAACTCTCAGAAGGAGTTGTATGATCGATGCGATGGGAATTGGAAGCGGGTCTTGAGGTTCTTGCAGTCTGTGGAACAATCATCTCAGATGGTGGAGACATCATCAGGCAATATGCAAATTACAACTGGAAAGTATCACACCTTGTTGATCAGCAATTCCTCTGTGTACTCTTGTGGTTCTGGCTTGTGTGGTGTACTAGGTCAAGGGCCTGAAACAACACAATGTGTAGCGTTTACCAGGATTGATTTCCCACCTTTGGCACGTGTGGTTCATGTTTCAGCCTCCTTTAACCATGCAGCCTTTGTTATGCAATCTGGAGAGGTATTCACATGTGGAGATAATTCATCTTCTTGCTGTGGGCATAAGGATACAACCCGACCAATTTTCAGGCCACGTCTTGTTGAATCCCTGAAAGGGATTCCTTGCAAGCAGGTTGCAGCAGGGCTCAACTTCACAGTCTTCCTCACTAGACAAGGCCATGTTTATACATGCGGAACTAACACACATGGCCAACTTGGTCATGGTGACACTCAGGACAGACCAACCCCCAAAATGATTGAAGTCTTTGATAATGTTGACTCTGTTGTTCAGGTTGCTGCCGGACCAAGCTATATCTTAGCCGTAACGGAAAATGGAGTTGCATACTCCTTTGGGTCTGGTGCTAACTTCTGCCTTGGTCATGGTGAGCAACCTAATGAGCTTCAGCCACGTGCTATACAGAAGTTTAGAAGGAAAGGTATTCACATTGTCCGTGTATCCGCTGGGGATGAGCATGCTGTGGCACTTGATTCGAATGGATTAGTATATACATGGGGCAAGGGATACTGTGGTGCTCTAGGCCATGGTGATGAGATTGAGAAAACAACTCCAGAAATGTTGACTAGTATGAAGAATCACTTGGCTGTTCAGGTATGCGCAAGAAAGAGGAAAACTTTTGTGCTAGTTGATTCGGGTTCAGTCTATGGCTTTGGCTCCATGGGATTCGGTAGCCTCGGCTTTCTGGACAGAAGGGTATCTGATAAAGTCCTGAAACCAAGAATCTTAGATACCTTAAGAGCTCACCATGTATCTCAAATCAGCACTGGCTTGTACCACACTGTGGCAGTCACTAGCAGAGGAAGGATATTTGGCTTTGGAGACAATGAAAGAGCACAACTTGGTCATGACACACTAAGAGGATGCCTTGAACCAACTGAGATATTCATCAAAGATTCATCTGAAGATGATGTAGAATCTTAA 1467 0.4444 MVDRFRPVSIEDLPSHLILEILCSGRLSAMDLVCLELTSKTFGGGHGLYPFKFRSLVDFATFQLCFSHVIYSRMAFNSQKELYDRCDGNWKRVLRFLQSVEQSSQMVETSSGNMQITTGKYHTLLISNSSVYSCGSGLCGVLGQGPETTQCVAFTRIDFPPLARVVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHKDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTRQGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVFDNVDSVVQVAAGPSYILAVTENGVAYSFGSGANFCLGHGEQPNELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGLVYTWGKGYCGALGHGDEIEKTTPEMLTSMKNHLAVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTVAVTSRGRIFGFGDNERAQLGHDTLRGCLEPTEIFIKDSSEDDVES* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1393 488 Pfam Regulator of chromosome condensation (RCC1) repeat 432 460 - -
Aev10g1393 488 Pfam Regulator of chromosome condensation (RCC1) repeat 325 353 - -
Aev10g1393 488 SUPERFAMILY RCC1/BLIP-II 107 410 IPR009091 -
Aev10g1393 488 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 235 287 IPR000408 -
Aev10g1393 488 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 394 448 IPR000408 -
Aev10g1393 488 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 342 393 IPR000408 -
Aev10g1393 488 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 435 445 IPR000408 -
Aev10g1393 488 PANTHER BNAA01G28890D PROTEIN 9 478 - -
Aev10g1393 488 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 328 338 IPR000408 -
Aev10g1393 488 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 9 478 - -
Aev10g1393 488 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 182 234 IPR000408 -
Aev10g1393 488 PRINTS Chromosome condensation regulator RCC1 signature 444 465 IPR000408 -
Aev10g1393 488 PRINTS Chromosome condensation regulator RCC1 signature 130 146 IPR000408 -
Aev10g1393 488 PRINTS Chromosome condensation regulator RCC1 signature 184 200 IPR000408 -
Aev10g1393 488 PRINTS Chromosome condensation regulator RCC1 signature 274 290 IPR000408 -
Aev10g1393 488 PRINTS Chromosome condensation regulator RCC1 signature 383 401 IPR000408 -
Aev10g1393 488 PRINTS Chromosome condensation regulator RCC1 signature 290 304 IPR000408 -
Aev10g1393 488 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 288 341 IPR000408 -
Aev10g1393 488 Pfam Regulator of chromosome condensation (RCC1) repeat 235 283 IPR000408 -
Aev10g1393 488 Pfam Regulator of chromosome condensation (RCC1) repeat 181 231 IPR000408 -
Aev10g1393 488 SUPERFAMILY RCC1/BLIP-II 378 477 IPR009091 -
Aev10g1393 488 Gene3D - 94 268 IPR009091 -
Aev10g1393 488 Gene3D - 269 487 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1393 Aev-Chr10 17295399 17298837 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1393 - - gmx:100782653 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1393 10 17295399 17298837 Aev10g1393 10 17295399 17298837 ECH