Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1353 ATGACTTTTTTCATCCATAAGGCTCAAACCCGAGACCCAACAAGGACTGTAGTAGATAGAGATAAAAGCAAGCAAGAGAAGAACAGAGGAAAATCAAGTGAACCAAACAGAACAGAACAGAGCATGGAGAAGGGAAGTGCTAGTTATGGCGGCACATCAACAAGACCTCTGTTAAGGGAAGTAGCTGATAATGAGGTTGTTGGTGAGGGATCAATTTGGAACAAGATATTGGAGTTGGAGGAAGCAAAACATCAACTATTGTTTTCACTTCCAATGATTCTCACAAACTTGTTCTATTTCTTGATCACTCTGGTTTCTGTCATGCTTGCTGGTCACCTTGGTGAGCTTCAACTTGCTGGTGCCACTCTTGCAAATTCTTGGTTTAGTGTCACCGGTGTTGCACTTACGGTTGGCTTAAGTGGGGCATTAGAAACACTATGTGGACAAGGATTTGGAGCAAAGGAATACCAAATGTTGGGAATTTATCTCCAATCTTCTTGCATCATAACCCTTATATTCTCCATCATCATATCCATTATCTGGTTCTTCACACAACACATCCTAGTTTTCCTTCATCAATCCTATGACATTGCAGCAACAGCAGCACTTTACATAAAGTACCTTTTCCCTGGCCTATTTGCTTATGGCTTATTGCAGAACATGTTAAGGTTTCTTCAGACACAATCTGTTGTAGCACCATTGGTTTTTCTCTCTGCTCTTCCTCTGTTGATTCATGCTGGTATTGCATATGGTTTGGTTTATGGGACAAGTCTTAGTTTTAAGGGTGCTCCAATTTCAGCTTCTGTTTCTCTGTGGATATCAACTTTGTTATTGGCCTTGTATGTCTTGTATGCAAAGAAGTTCAACAAGACATGGGAAGGGTTTTCAACCAAGTCATTTCATTATGTATTTACAAACTTGAAACTAGCTCTTCCATCTGCTGCAATGGTATGTTTGGAGTATTGGGCTTTTGAAATTTTGGTTCTCTTGGCTGGACTATTACCTGACTCAGAAATAACTACTTCATTGATTGCAATATGTACAAACACAGAATTCATTGCCTACATTATCACTTATGGCCTAAGTGCTGCTGCAAGCACAAGGGTTTCCAATGAATTGGGAGCAGGCCGGCCGGATCGAGCGAAACAGGCGATGGGAGTTTCTCTCAAGCTCTCTCTTCTCCTTGGTTTATGTTTTGTTTTGGCACTTTTGTTTGGCCATGGAATCTGGATTCAAATGTTCAGTACTAGTACTCAAATCAAAGAGGAGTTTGCTTCAATAACACCTTTACTTTCAATATCTATACTATTGGATGCTTTCCAAGGAGTCTTATCAGGTGTGGTTAGAGGATGTGGGATGCAGCACTTGGCTGCTTGTATCAACCTTGCATCATTTTATCTCATTGGTTTACCAATATCATGCCTACTAGGATTTAAGACCAATTTGCAGTTCAAGGGTTTATGGATAGGTTTGATTTGTGGGTTGGTTTGTCAAAGTGTGGCTCTCTTAATTTTGACATGGCGAGCCCAATGGACCAAACTAGATCTCTCTGAGGACAAAGACAAAGACCAACAACTTGTAGTTTAA 1587 0.4045 MTFFIHKAQTRDPTRTVVDRDKSKQEKNRGKSSEPNRTEQSMEKGSASYGGTSTRPLLREVADNEVVGEGSIWNKILELEEAKHQLLFSLPMILTNLFYFLITLVSVMLAGHLGELQLAGATLANSWFSVTGVALTVGLSGALETLCGQGFGAKEYQMLGIYLQSSCIITLIFSIIISIIWFFTQHILVFLHQSYDIAATAALYIKYLFPGLFAYGLLQNMLRFLQTQSVVAPLVFLSALPLLIHAGIAYGLVYGTSLSFKGAPISASVSLWISTLLLALYVLYAKKFNKTWEGFSTKSFHYVFTNLKLALPSAAMVCLEYWAFEILVLLAGLLPDSEITTSLIAICTNTEFIAYIITYGLSAAASTRVSNELGAGRPDRAKQAMGVSLKLSLLLGLCFVLALLFGHGIWIQMFSTSTQIKEEFASITPLLSISILLDAFQGVLSGVVRGCGMQHLAACINLASFYLIGLPISCLLGFKTNLQFKGLWIGLICGLVCQSVALLILTWRAQWTKLDLSEDKDKDQQLVV* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1353 528 Pfam MatE 91 250 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aev10g1353 528 Pfam MatE 312 473 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aev10g1353 528 MobiDBLite consensus disorder prediction 12 38 - -
Aev10g1353 528 CDD MATE_eukaryotic 81 513 IPR045069 GO:0042910|GO:1990961
Aev10g1353 528 MobiDBLite consensus disorder prediction 9 54 - -
Aev10g1353 528 PANTHER MULTIDRUG RESISTANCE PROTEIN 50 522 - -
Aev10g1353 528 MobiDBLite consensus disorder prediction 39 53 - -
Aev10g1353 528 TIGRFAM matE: MATE efflux family protein 91 488 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aev10g1353 528 PANTHER PROTEIN DETOXIFICATION 50 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1353 Aev-Chr10 17022526 17036008 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1353 K03327 - gmx:100816310 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1353 10 17022526 17036008 Aev10g1353 10 17022526 17036008 ECH