Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1342 ATGCCGTACAGGATCCGACTACTTCGCCGGTGGGGAAACAACCACCAACCGACACTCGAAGCTCTCTTCACCACCATCATTCACCGCCGCAACATCCGAACCCAAACCAACCTTAGAATTCCTCAAAATCCTTCAACACTGTCCCATCACTTACACTTCATCGGACTCGTCGAAACCGCACGGTCCCTGCATTCCGTTAAGGACCCATCACCACCACCACCACCTGTTTTTGTACAGAACCTGCTCAAGTTCCGGAGGGACAAGCCCGTCGATCAGGTTGAACGAGCACTTGATCTATGCGATTTTGACATCGACGACGACCTCGTCCTCGACGTGCTGAAACGGCACCGTTCCGATTGGAGGAATGCACTCGTGTTCTTCAACTGGGTCTCCAAAGTGGGTCCCGCGCGTAATGGGTATGAGCCGAGTTCGCGCGTCTGCAACGAGATTGTTGATATTCTTGGGAAGATGAAGCGGTTTGAGGAACTGTACCAGGTGCTTGATGAAATGTCCAAGAGGGAGGGTATCATTGACGGAGGGATTTTCGGGACCTTGATTCGTAGATATGCGGGTGCACATAAGGTGGAGGAAGCAGTTTCCATATTCTATAGGAGGAAAGAGTTTGGGTTGGAGCTTGATCCCGAAGCATTTAGGACCCTCTTGATGTGGCTGTGTAAGTACAAGCATGTGGAAGATGCAGAAACTCTGTTTCACAGTAAGGAGAATGAGTTTCCTCCTGATATAAAGTCATGGAATATCATTCTCCATGGTTGGTGCGTTTTGGGGAACACGCAGGAGGCGAAGAGGTTGTGGAAAGACATAATTGCTTCTAAGTGCAAGCCTGATCTTTTCACCTATGCAACGTTTATCAAGGCATTGACCCAGAAAGGGAAGCTGGGCACTGCATTGAAGTTGTTCCATGGAATGTGGGATAAGGGGTGCAACCCTGATGTTGTGATATGCAACTGCATCATCGACGCTCTTTGTTTCAAGAAGAGAGTTCCCGAGGCATTGGAAATTTTCCAATCGATGAGGGAATGGGGCTGCGAACCTAATGTAGCTACTTACAATTCCTTGATCAAGCACATGTGTAAGATACGGCGAATGGAGAAGGTCTACGAGCTGGTTAGCGACATGGAGAGGAGGAAGGGGACTTGTTTGCCTGATGTTGTTACTTACAGCTACTTGCTTAGGTCCTTGAAGGAGCCGGGGGAAGTTCGCGGGGTTTTGGACAGGATGGAGAGAAACGGGTGCAGCATGAATGATGATGTCTACAACTTGGTTTTGAGGTTGTACATGGGATGGGATGATCAGAATGGGGTGAGGAGAACATGGGAAGAGATGGAAAGGAACGGATGGGGGCCAGACAGGAGAACGTATACGATCATGATTCATGGCCACCATGAAAAGGGGAGAACGAAGGATGCTTTGCGATATTTTAGGGAGATGGTTTCTAAGGGAATGCTGCCCGAGCCTAGGACGGAGAAACTAGTGAACTCCATGAACATTCAGTTGAAGGAGACAGCAGGAAAACAAGAAGGATAG 1545 0.4893 MPYRIRLLRRWGNNHQPTLEALFTTIIHRRNIRTQTNLRIPQNPSTLSHHLHFIGLVETARSLHSVKDPSPPPPPVFVQNLLKFRRDKPVDQVERALDLCDFDIDDDLVLDVLKRHRSDWRNALVFFNWVSKVGPARNGYEPSSRVCNEIVDILGKMKRFEELYQVLDEMSKREGIIDGGIFGTLIRRYAGAHKVEEAVSIFYRRKEFGLELDPEAFRTLLMWLCKYKHVEDAETLFHSKENEFPPDIKSWNIILHGWCVLGNTQEAKRLWKDIIASKCKPDLFTYATFIKALTQKGKLGTALKLFHGMWDKGCNPDVVICNCIIDALCFKKRVPEALEIFQSMREWGCEPNVATYNSLIKHMCKIRRMEKVYELVSDMERRKGTCLPDVVTYSYLLRSLKEPGEVRGVLDRMERNGCSMNDDVYNLVLRLYMGWDDQNGVRRTWEEMERNGWGPDRRTYTIMIHGHHEKGRTKDALRYFREMVSKGMLPEPRTEKLVNSMNIQLKETAGKQEG* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1342 514 Pfam PPR repeat family 246 293 IPR002885 -
Aev10g1342 514 Pfam PPR repeat family 316 365 IPR002885 -
Aev10g1342 514 Gene3D Tetratricopeptide repeat domain 382 508 IPR011990 GO:0005515
Aev10g1342 514 Pfam PPR repeat 459 487 IPR002885 -
Aev10g1342 514 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 282 316 IPR002885 -
Aev10g1342 514 PANTHER RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED 59 513 - -
Aev10g1342 514 TIGRFAM PPR: pentatricopeptide repeat domain 284 318 IPR002885 -
Aev10g1342 514 TIGRFAM PPR: pentatricopeptide repeat domain 250 282 IPR002885 -
Aev10g1342 514 TIGRFAM PPR: pentatricopeptide repeat domain 319 353 IPR002885 -
Aev10g1342 514 TIGRFAM PPR: pentatricopeptide repeat domain 355 383 IPR002885 -
Aev10g1342 514 TIGRFAM PPR: pentatricopeptide repeat domain 459 490 IPR002885 -
Aev10g1342 514 TIGRFAM PPR: pentatricopeptide repeat domain 146 175 IPR002885 -
Aev10g1342 514 Gene3D Tetratricopeptide repeat domain 240 310 IPR011990 GO:0005515
Aev10g1342 514 Gene3D Tetratricopeptide repeat domain 311 381 IPR011990 GO:0005515
Aev10g1342 514 Gene3D Tetratricopeptide repeat domain 89 239 IPR011990 GO:0005515
Aev10g1342 514 SUPERFAMILY TPR-like 210 485 IPR011990 GO:0005515
Aev10g1342 514 Pfam Pentatricopeptide repeat domain 387 432 IPR002885 -
Aev10g1342 514 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 352 382 IPR002885 -
Aev10g1342 514 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 59 513 - -
Aev10g1342 514 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 247 281 IPR002885 -
Aev10g1342 514 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 317 351 IPR002885 -
Aev10g1342 514 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 456 490 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1342 142 494 Glycosyltransferase AT1G05670 23.416 5.82e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1342 - - ahf:112769232 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1342 10 16907214 16908941 Aev10g1342 10 16907214 16908941 ECH