Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1324 ATGAGGAGCATTATTTCATCATCAAAAGCAGCAAGTTTCCCTCTTGTTGTTTCTCTAGTAGTATCAGCACTTTTGTTAATTCATGTTGCTGAATGCCGTTATCTTCAAACTCACACTACTAGTTCCTCTGAGTTTGTTTCTGATGGAGTTAATGATGTTTTTCAACCTCAGAATGCTAATACTACTACTAGCACTTACCTAGGACATCTCAAAGGCCATGAGGAGGTTGTTGTTGTTGAGTCTCATGGTGGTGGTGGGAATTTCTGTAAACAATTGTATGGTTTCTTGCCATGTTCCAACAGCATTTTTGGGCACTTATTTCTTATTTTGGTGTATGAGTATTTGTTGTTCCATGGAGAATCATATTTGGCTGCTGGGGGTGAACAAATCTTCAAGATTCTTGGCCCTGGTGTTTTTGGTGCTAGTGCCTTTGACATTCTTGGTGCTCTTCCTGAGTCCTTAATTCTTCTTGTGACAGGAATTTCCAGTGATAAGGAGAGTGCACAAGAGTATGCTTCAACAGGAGTTGGACTATTGGCAGGTTCATCCATCTTGCTTCTCACAGTTGTATGGGGAACTTGTGTCATCATTGGCAACCAAAAATTGAAAGAAGAATCTGAATCTGATGCCATCTTGTATTCATCAACTTCAAGGATAAAAGAGTCATTTACTGGTTATGGAATAACTATGGATGTTGAGACTAGGAAGATGGCAAGAATCATGGTTTTCTCAATTATACCTCTCATCATAATGCAGATTTCAAATATAAACCCTAACTCTTCGACACTAAGAAATGTTGCCTTGATGGTTGCTCTCACTGTAGCTGTCATTTTTCTCCTCTCATACTTCATTTACCAGATCTTCAAACCGCAGATAGAGAAGATAAGACTAGAATATATAAAACATGATGATTTAATATTGAGAATTTTGCAACGTGTTGAAAAGCAAACTCTGCAGAAGATCCTTGCTGAGGATGGGACTCCCAATGTATCTGCCATAAGTGGGTTATACCATGAAATAAGCCAACATGGGAGCAAAGATTTATCAGCATCTGAAGTAAAAGATCTACTGCTTAAGAACAAATTAACTGATACAAATATCAAAGAGGAACAAATAGCAGACATGTTGAAGATTTTTGACCGAAATGGTGACCAAATTATAACCAAGGAAGAATTTGTCACTGGCTTAACAGAATACATTAACCAAACAAAGCATGCTCTTGACAGACAGTACCTACCAAAAGAATCACTTAACAAAGTGTATCAGACTTTTATCAAGCCATGGATTGAACATGTGAGAAAAGAGAGAGAATTAAAGGGACATCTTATATCTGAAGTATTAAGGCATGTTCAGAATGATGTGGTTGGAAGGCTTCTCAATGATGATGGAACACCTGATACAACTGCTATCACAAGGCTATTTGAGGAGATGGATTGCAATGGAGATAAGCATGTTTCGAGATCCGAGTTAGAGAGAATGGTCAAGGACATTCACTTTAGCAGAGCTGTGGATGCAGAGGATGCAGTTACAAAACTTGTTCAAGAACTTGATGTCAACAGAGACAATGAAATCAGTGAGAAGGAATTTGTTAATGGCTTCACAAAATGGATAAACTCAAATACCTCAAAGTCTTCACATCATGGAATTCATCATCATTCTTGGGAAGAAGTTGAAAAGGTGATGGAAGAGAACCAAAGCAAAGGAATATCTGCATGGTTGGAGGCTATAGGATATGTGGTGTTGGGAGTTACTATGTTGTCACTTCTTGCTGAGCCCTTAATAGCAAGTGTTCAGAACTTCTCTGAAGAAGCAGGACTCTCTTCCTTTTTCATCTCATTTATTATAGTTCCCCTTGCCACAAATTTTAGAGAAGCAACTTCAGCAATCAAAGAAGCTAGCCACAAGAAAAGTAGTAATACTTCTCAAACAATGTATGAGATTTATGGATCAGTGTTCATGAACAACATTCTAGGATTTGTGGTGATATCTATCCTTATATATGTGAGAGATATAACATGGGAATTCTCAGCAGATGTGCTAGTTGTGGCAATTGTGTGTGCTGTGATGGGCCTGGCTGCTAGTTTTAGGGCCACATTCCCTCTATGGACATCAATTCCAGCATATGTCTTGTACCTTATATCATTGCTTTTGGTGCTTCTTCTCAAAGATGTCCTTCATTATGTTTAG 2187 0.3827 MRSIISSSKAASFPLVVSLVVSALLLIHVAECRYLQTHTTSSSEFVSDGVNDVFQPQNANTTTSTYLGHLKGHEEVVVVESHGGGGNFCKQLYGFLPCSNSIFGHLFLILVYEYLLFHGESYLAAGGEQIFKILGPGVFGASAFDILGALPESLILLVTGISSDKESAQEYASTGVGLLAGSSILLLTVVWGTCVIIGNQKLKEESESDAILYSSTSRIKESFTGYGITMDVETRKMARIMVFSIIPLIIMQISNINPNSSTLRNVALMVALTVAVIFLLSYFIYQIFKPQIEKIRLEYIKHDDLILRILQRVEKQTLQKILAEDGTPNVSAISGLYHEISQHGSKDLSASEVKDLLLKNKLTDTNIKEEQIADMLKIFDRNGDQIITKEEFVTGLTEYINQTKHALDRQYLPKESLNKVYQTFIKPWIEHVRKERELKGHLISEVLRHVQNDVVGRLLNDDGTPDTTAITRLFEEMDCNGDKHVSRSELERMVKDIHFSRAVDAEDAVTKLVQELDVNRDNEISEKEFVNGFTKWINSNTSKSSHHGIHHHSWEEVEKVMEENQSKGISAWLEAIGYVVLGVTMLSLLAEPLIASVQNFSEEAGLSSFFISFIIVPLATNFREATSAIKEASHKKSSNTSQTMYEIYGSVFMNNILGFVVISILIYVRDITWEFSADVLVVAIVCAVMGLAASFRATFPLWTSIPAYVLYLISLLLVLLLKDVLHYV* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1324 728 ProSiteProfiles EF-hand calcium-binding domain profile. 504 539 IPR002048 GO:0005509
Aev10g1324 728 Pfam EF-hand domain pair 469 532 IPR002048 GO:0005509
Aev10g1324 728 ProSitePatterns EF-hand calcium-binding domain. 380 392 IPR018247 -
Aev10g1324 728 SUPERFAMILY EF-hand 336 539 IPR011992 -
Aev10g1324 728 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 572 726 - -
Aev10g1324 728 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 19 413 - -
Aev10g1324 728 Gene3D - 408 549 - -
Aev10g1324 728 ProSiteProfiles EF-hand calcium-binding domain profile. 465 500 IPR002048 GO:0005509
Aev10g1324 728 ProSiteProfiles EF-hand calcium-binding domain profile. 367 402 IPR002048 GO:0005509
Aev10g1324 728 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 420 548 - -
Aev10g1324 728 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 420 548 - -
Aev10g1324 728 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 19 413 - -
Aev10g1324 728 ProSitePatterns EF-hand calcium-binding domain. 478 490 IPR018247 -
Aev10g1324 728 ProSitePatterns EF-hand calcium-binding domain. 517 529 IPR018247 -
Aev10g1324 728 Gene3D - 327 407 - -
Aev10g1324 728 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 572 726 - -
Aev10g1324 728 SMART efh_1 469 497 IPR002048 GO:0005509
Aev10g1324 728 SMART efh_1 508 536 IPR002048 GO:0005509
Aev10g1324 728 SMART efh_1 371 399 IPR002048 GO:0005509
Aev10g1324 728 Pfam Sodium/calcium exchanger protein 576 719 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1324 Aev-Chr10 16767038 16771964 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1324 420 721 EF-hand Containing Proteins AT1G53210 40.061 2.97e-61 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1324 - - ahf:112771843 1084.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1324 10 16767038 16771964 Aev10g1324 10 16767038 16771964 ECH