Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1284 ATGGCGGGGTACAGGGCGGACGATGACTACGACTACCTCTTCAAGGTGGTGCTGATCGGTGATTCAGGGGTTGGGAAGTCGAACCTGCTCTCTCGGTTCACCAAGAACGAGTTCAACCTTGAGTCCAAGTCCACCATTGGCGTCGAGTTCGCCACACGCACCTTGAACGTCGACTCCAAAGTCATCAAGGCCCAGATCTGGGACACCGCCGGTCAAGAGAGGTCTATTTCTTCTTCTTCTTCTTCTTCTTACTTGGTGCTTGTTCTCTGTGTGGGTTTTCCTATTTTGGGGGTTTTTTTGGTTATGTCGAAGATCATGCTGAGCTGGTATCGTGCCATCACCAGTGCTTACTATCGCGGGGCAGTAGGTGCACTTCTTGTGTATGACGTTACCCGCCATGCAACATTCGAAAACGTTGACAGATGGCTGAAAGAATTGCGAAACCACACGGACGCCAACATCGTCGTGATGCTCGTAGGAAACAAATCAGATCTTCGTCACCTCGTAGCCGTATCAACCGAAGATGGCAAGTCATATGCTGAGAAAGAATCACTATACTTCATGGAAACCTCGGCTCTTGAGGCTACCAATGTAGAGAACGCATTCGCTGAAGTCCTGACTCAAATCTACCGCATTGTGAGCAAGAAAGCAGTAGAGGCGGCCGAGAATGGAAATGCATCCGTACCGGCAAAAGGAGAGAAAATCGATCTCAAAAATGATGTGTCTGCCTTGAAGAGAGTTGGTTGCTGCTCAAGCTAA 759 0.4928 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDTAGQERSISSSSSSSYLVLVLCVGFPILGVFLVMSKIMLSWYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDANIVVMLVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRIVSKKAVEAAENGNASVPAKGEKIDLKNDVSALKRVGCCSS* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1284 252 PANTHER RAS-RELATED PROTEIN RABA1B 109 252 - -
Aev10g1284 252 TIGRFAM small_GTP: small GTP-binding protein domain 110 205 IPR005225 GO:0005525
Aev10g1284 252 TIGRFAM small_GTP: small GTP-binding protein domain 12 75 IPR005225 GO:0005525
Aev10g1284 252 ProSiteProfiles small GTPase Ras family profile. 2 252 IPR001806 GO:0003924|GO:0005525
Aev10g1284 252 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 215 IPR027417 -
Aev10g1284 252 SMART rho_sub_3 16 208 IPR001806 GO:0003924|GO:0005525
Aev10g1284 252 PANTHER DRAB5-RELATED 1 79 - -
Aev10g1284 252 ProSiteProfiles small GTPase Rab1 family profile. 9 250 - -
Aev10g1284 252 SMART rab_sub_5 14 212 - -
Aev10g1284 252 PANTHER RAS-RELATED PROTEIN RABA1B 1 79 - -
Aev10g1284 252 SMART ras_sub_4 11 212 - -
Aev10g1284 252 CDD Rab11_like 11 210 - -
Aev10g1284 252 Pfam Ras family 110 210 IPR001806 GO:0003924|GO:0005525
Aev10g1284 252 Pfam Ras family 15 75 IPR001806 GO:0003924|GO:0005525
Aev10g1284 252 PANTHER DRAB5-RELATED 109 252 - -
Aev10g1284 252 PRINTS Transforming protein P21 ras signature 55 77 - -
Aev10g1284 252 PRINTS Transforming protein P21 ras signature 14 35 - -
Aev10g1284 252 PRINTS Transforming protein P21 ras signature 37 53 - -
Aev10g1284 252 PRINTS Transforming protein P21 ras signature 187 209 - -
Aev10g1284 252 Gene3D - 6 250 IPR027417 -
Aev10g1284 252 ProSiteProfiles small GTPase Rho family profile. 7 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1284 Aev-Chr10 16450458 16453333 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1284 K07904 - gmx:100810759 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1284 10 16450458 16453333 Aev10g1284 10 16450458 16453333 ECH