Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1235 ATGCAAGCATCACTTGCATGCTCTCCATATTCTCATGGAAACTTACTCCTCAAACTCAAATCACAATCACATTCACACACCAACAACAACAATCACAACAACCTTGTTTACTCTTCATCAATCACTTTCCACACACCCAACTCTTTTCTCAAACTCCAGCATCAAACTCTGCTAACCCAACCCACTTTGATCCCCACTTCGAAATCACAGAGAATTCGCAGCCCAAATGTTGGTCAACTTCGTTGCGGCATTTCGTCGAACGGGTACGGCGCAAATGAGAAGAGAAGTGTTAGGGAGTGGGTTGAGTGGTTCGGTGAGGTGCTTTCCACTGCGTTTCCTCTATGGGTTACGCTTGGGTGCGTGTTGGGTTTGCTGAGACCCAATTCGTTCAATTGGGTCACACCCAAATTGAACATTGTGGGACTCACAATTATCATGCTTGGAATGGGTATGACTCTCACTCTTGATGATCTTCGTGGTGCTCTTGCTATGCCAAAGGAAGTTCTATCTGGTTTTGTGCTTCAGTATTCGGTGATGCCATTATCTGGATTTCTTGTAAGCAAACTCTTAAATCTGCCATCACATTATGCAGCTGGTTTAATATTAGTTGCTTGCTGTCCTGGTGGCACAGCTAGTAACATTGTTACGTATCTTGCACGTGGAAATGTGGCGCTTTCTGTGTTAATGACTGCTGCAAGCACTTTATCAGCTGTGGTCATGACTCCTTTTCTGACTGCCAAACTTGCCGGCAAATATGTAGCTGTGGATGCAGCCGGATTATTGATTTCAACATTGCAAGTTGTGCTCTTACCTGTATTGGCTGGTGCATTTCTGAATCAGTATTTCCAACCTCTTGTTAAATTAGTCTCTCCATTGATGCCACCCTTGGCTGTAGCAACTGTGGCAATTTTATGTGGAAATGCAATTGCTCAGAGTTCTTCAGCAATCCTAATGTCTGGTGGACTAGTTATTTTAGCATCATCCCTTCTTCATGCTTCTGGGTTTTTCTTCGGATATGTACTCGCAAGATTGCTTGGGATCGACGTCTCATCATCGCGAACGATATCCATAGAGGTTGGCATGCAGAACTCGGTGCTTGGCGTTGTTCTGGCTGCTCAGCATTTTGGAGATCCCCTAACCACAGTACCATGTGCCGTTTCAAGTGTCATTCACTCGATCTTTGGTAGTATCCTCGCCGGAATTTGGAGACGCTCTGTGCCCGCCAAGACGAAGGACTGA 1239 0.452 MQASLACSPYSHGNLLLKLKSQSHSHTNNNNHNNLVYSSSITFHTPNSFLKLQHQTLLTQPTLIPTSKSQRIRSPNVGQLRCGISSNGYGANEKRSVREWVEWFGEVLSTAFPLWVTLGCVLGLLRPNSFNWVTPKLNIVGLTIIMLGMGMTLTLDDLRGALAMPKEVLSGFVLQYSVMPLSGFLVSKLLNLPSHYAAGLILVACCPGGTASNIVTYLARGNVALSVLMTAASTLSAVVMTPFLTAKLAGKYVAVDAAGLLISTLQVVLLPVLAGAFLNQYFQPLVKLVSPLMPPLAVATVAILCGNAIAQSSSAILMSGGLVILASSLLHASGFFFGYVLARLLGIDVSSSRTISIEVGMQNSVLGVVLAAQHFGDPLTTVPCAVSSVIHSIFGSILAGIWRRSVPAKTKD* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1235 412 PANTHER SODIUM-BILE ACID COTRANSPORTER 27 411 IPR004710 -
Aev10g1235 412 Pfam Sodium Bile acid symporter family 140 314 IPR002657 GO:0016020
Aev10g1235 412 PANTHER SODIUM/METABOLITE COTRANSPORTER BASS1, CHLOROPLASTIC-RELATED 27 411 - -
Aev10g1235 412 Gene3D - 96 405 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1235 Aev-Chr10 15979554 15982603 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1235 81 412 Organic Solute Cotransporters AT1G78560 77.711 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1235 K03453 - tcc:18594413 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1235 10 15979554 15982603 Aev10g1235 10 15979554 15982603 ECH