Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2720 ATGACCAAGAGGCCCAGAACCGCCATCGACAAGCCCCTTCTCGATCTTTGCCATCGAGAGCTCGGCCAACTTTCCGCCAGAAATTTCGCTCACCGTCTCGGCGCCTCCGAGGATCTTGTACTTCGGCTTGATGTATTGAGGAAGCTGGAAAAGCACAGAGGTTGTGTGAACACTGTGAGTTTCAATGCTGATGGTGATATTTTGGTATCTGGTTCCGATGACCGAAGGGTCATTCTCTGGGACTGGGAAACTGGGCGTATTAAGCTGTCCTTCCATTCTGGTCACAGTAACAATGTTTTCCAGGCCAAAATCATGCCCCACTCCGATGATCGGAGCATTGTCACTTGTGCTGCTGATGGACAGGTGAGACATGCTCAAATTCGTGAAAATGGAGGAGTGGAAACTAAGCTGCTGGCCAAGCATCAAGGACGGGCTCATAAGTTGGCTATCGAGCCCGGTAGCCCTCATATATTTTATACATGCGGTGAAGATGGATTAGTACAGCATTTTGATTTGAGAACTGGCACTGGAACAGAACTTTTTACTTGCCAGCCAATTAAAGATAGATGGAATTACATGCCAGTCATCCATCTTAATGCAATTGCAATTGATCCAAGGAACCCAAATCTCTTTGCAGTTGCTGGGTCTGATGAGTATACTCGGGTTTATGATATTCGCAAATATAAGTGGGATGGATCATCTGATTTTGGTCAACCTACTAATTTCTTTTGCCCTCCACACTTGATTGGTGATGAGCGAGTAGGAATAACAGGCCTGGCCTTTTCTGAACAAAGAGAACTACTTGTATCATACAATGATGAGTATATTTACCTTTTTACCCAAGATATGGGCTTGGGACCTAACCCTGCTCCTGGGTCCCCTGTATCTATGAGCAGTGATGCAAGTGAAATAGGAGGTAGTCATGGCTCTGCTGGATCTCCGTCAAATGTGGACGCTGAGGTAAAAATCACTCCACAAGTTTATAAGGGACACAGGAATTGTGAGACAGTGAAGGGTGTTAACTTTTTTGGACCTAAATGTGAGTATGTGGTCAGTGGGTCAGACTGTGGCCGGATTTTCATTTGGAGAAAAAAAGATGGCAAGCTTATTCGTGTCATGGAAGCTGATAAGCATGTTGTGAACTGCATTGAGTCTCATCCCCATACAATGGTTCTTGCAAGCAGTGGAATTGAGCATGACATCAAGATGTGGACTCCAAAGGCCCACGAGAAAGCTACTTTGCCCAAAAATATTGAGCAGAAACCCAAGGCCAGGGGCTGGATGTACCGGATAGCTTCTCCTGAAGAACTAATGTTGCAACTGTTTTCACTTCCAAGAAGGAGGGTTAGGACAGAGAGCAACGGAGAGAACTCGGCTGCTGATCGAGAACTTCTTGAGCTGATTTTGACATTCAATGCTAACAGTGACAGTTCTAATGATGACGATGACGGCGACGGAGACACAACCAGCCAGGAGGACTTGTTCAGTTGA 1491 0.4588 MTKRPRTAIDKPLLDLCHRELGQLSARNFAHRLGASEDLVLRLDVLRKLEKHRGCVNTVSFNADGDILVSGSDDRRVILWDWETGRIKLSFHSGHSNNVFQAKIMPHSDDRSIVTCAADGQVRHAQIRENGGVETKLLAKHQGRAHKLAIEPGSPHIFYTCGEDGLVQHFDLRTGTGTELFTCQPIKDRWNYMPVIHLNAIAIDPRNPNLFAVAGSDEYTRVYDIRKYKWDGSSDFGQPTNFFCPPHLIGDERVGITGLAFSEQRELLVSYNDEYIYLFTQDMGLGPNPAPGSPVSMSSDASEIGGSHGSAGSPSNVDAEVKITPQVYKGHRNCETVKGVNFFGPKCEYVVSGSDCGRIFIWRKKDGKLIRVMEADKHVVNCIESHPHTMVLASSGIEHDIKMWTPKAHEKATLPKNIEQKPKARGWMYRIASPEELMLQLFSLPRRRVRTESNGENSAADRELLELILTFNANSDSSNDDDDGDGDTTSQEDLFS* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2720 496 MobiDBLite consensus disorder prediction 289 316 - -
Aev09g2720 496 Pfam WD domain, G-beta repeat 326 362 IPR001680 GO:0005515
Aev09g2720 496 Pfam WD domain, G-beta repeat 46 81 IPR001680 GO:0005515
Aev09g2720 496 PANTHER WD40/YVTN REPEAT-LIKE-CONTAINING DOMAIN-CONTAINING PROTEIN-RELATED 8 480 - -
Aev09g2720 496 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 49 86 - -
Aev09g2720 496 MobiDBLite consensus disorder prediction 473 496 - -
Aev09g2720 496 ProSiteProfiles Trp-Asp (WD) repeats profile. 49 90 IPR001680 GO:0005515
Aev09g2720 496 MobiDBLite consensus disorder prediction 292 316 - -
Aev09g2720 496 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 8 480 IPR045151 -
Aev09g2720 496 SMART WD40_4 241 280 IPR001680 GO:0005515
Aev09g2720 496 SMART WD40_4 84 126 IPR001680 GO:0005515
Aev09g2720 496 SMART WD40_4 42 81 IPR001680 GO:0005515
Aev09g2720 496 SMART WD40_4 131 171 IPR001680 GO:0005515
Aev09g2720 496 SMART WD40_4 366 405 IPR001680 GO:0005515
Aev09g2720 496 SMART WD40_4 176 224 IPR001680 GO:0005515
Aev09g2720 496 SMART WD40_4 321 363 IPR001680 GO:0005515
Aev09g2720 496 Gene3D - 37 407 IPR015943 GO:0005515
Aev09g2720 496 SUPERFAMILY WD40 repeat-like 41 404 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2720 Aev-Chr9 27982875 27986663 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2720 327 404 Miscellaneous Gene Families AT5G08390 28.750 9.06e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2720 K11804 - gmx:100791300 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2720 09 27982875 27986663 Aev09g2720 09 27982875 27986663 ECH