Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2714 ATGGTGGTTTTAGCGTTCCATCATCAGCATCACGGCAGCCTGTGCTTGCTGAATTCCAACACACGCTCCCCAAAACCCAAACACTCACTGAATTCAATACCTTCTTCATATTCCAATGTTGCTTCTTCTTCGTCTCGTCTCACGAGGGCTCTCATTCAGACCCTGCGTTCTGGGTCCATGCAGGATGCGCTCTCCCTGTTCGACAAAATGTCCCACTGCACCACCTTTCACTGGAACCTCATCATCAGAGGCTACACCCATAATGGGTTGTTTCTGGATGCTCTCAACTTCTATCTTCAAATGCGCTTTCAAGGGGTTCCTACTGATTACTTCACTTACCCTTTTGTGATCAAAGCTTGTGGGGGGTTGTTGGCTCTCAAAGAAGGTGAAAAGGTTCACGCAAACCTGTTTAAGTTGGGTTTGGATGAGGATCTTTATATTTGCAATGCACTCACTGTTATGTATGGGAAGCTTGGTCACATTGCTTCTGCATTGAGGGTTTTCGAGGAAATGCCTGTTAGGGACTTGGTTTCTTGGAACTCTATTATTACTGCTCACTCTTTGGTCCAACAATACTTTCGCTCTTTGGAGTGGTTTAGGAGAATGCTGCAAGTTGGGATTCGGCCGGATAAGTTCAGCTTAATCAATGCTCTCGAGGCATGCTCTCTTTCTGCCTATCCATTAGGGGGAAGAGAAGTACATTGCTATGCACTCAAACTGGGTTTTGACTTAGATGTTATGATTCAGACATCGCTTGTTGACATGTACAGCAAGTGTGGGATGATAAATTATGCGGACATTGTTTTTGATAGTATATCTTTGAGGAATAATGTGGCTTGGAATGCAATGATTGGTGGGTATTCTATGAATGGCCAACCACTTGAGGCTTTTTGTTCTTTGAGAAAGATGCTCAATGATGATAAATTGGCTGTTGATAATGTCACGCTCATAAACCTGCTTCCTTCCTGTGCACAACTAGGAGCTGTTTTGGAGGGTAAGTCTATCCATGGACTTGCCATAAGGAAAGGCTTTCTACCTCATCCAGTATTAGAAACAGCTCTGCTTGACATGTATGGTGAGCTTGGTATACCCAAGTTGGCAGAGCTAACCTTTGATCAGATGATGGTTAAGAATTTGGTAACATGGAATGCCATGATTTCTGTATATGTACGGAATGGATTGTACAAGAAGGCCTTAAAACTATATGAAGAACTTTTGAGTGTATATCACAAACCAGATACAGTTACTATCGCAAGCATCCTTCCTGCCTATTCAAATTTAGCATCACTAAGGGAGTGCAGGCAAATTCATGGTTATATAGTGAAATTGCATTATCACTCAAATACATTTGTTTCGAATTCGATTATATATATGTATGCTAGTTGTGGAGATCTAGCAAAAGCCCGTCAAATATTCGATCAAATGCCTTGTAGAGATATAGTATCATGGAATACTATGATCATGGCTTATGCCATTCATGCTATGGGGAGAATGTCCATCGAACTATTTTCTGAGATGAAGAGAAGAGGAATTCAGCCTAACGATAGCACTTTTGTTTCGCTGTTATCTTCTTGCAGCAATTCCGGCATGGTCAATGAAGGTTGGACATACTACAATTCCATGAAACTGGACGACGGTATAGAGCCAAAAATAGAGCACTATGGATGTATGCTCGATCTTATTGGTAGAACTGGTGACTTGGACCAAGCCGTGAATTTTATAGAAGAAATGCCACTATTGCCTACTGCCCGGATATGGGGATCATTACTGAATGCTAGTAGAAACAAAAGAAACATAGAATTAGCTGAATTCGCTGCTGAGCGTATCTTGTCGATAAGGCATGATAATACAGGTTGTTACATCTTACTTTCTAACTTGTATGCTGAAGCTGGGATGTGGGACAAAGTGGAACACATAAAATCTGTCATGAAGATGGATGGAGCAGAGAAAACCGTATCTTGCAGCACAGTAGAAGCTAAATTTAGGCTGCACAGGTTTATCAATCATGACAGATTTCATCCCGAGTCTGACATGATTTATGATGTTCAGAGTATCATTTCAAGGAATACGGTTCAAAAAACATGCATCCATGGTGCCACCAAATTCAAGCCATCAGGCCTGGCTAGAAGAAAAGCAAAATCACCTGAGTACCATAGTGTAAGATTGGCAGTATGTTTTGGACTCATCTCTACTGCACTTGGAAACCCTGTTCTTGTCAGAAAAAACACAAGAATATGTGAAGATTGCCATGTTGTTGTAAAGAGGATCTCAGAGATTACAAAGAGAGAAATTGTAGTGGGAGATTCTAAAGTCTTCCACCACTTCAGAGATGGGCACTGTTCTTGTGGTGATTACTGGTAA 2361 0.4147 MVVLAFHHQHHGSLCLLNSNTRSPKPKHSLNSIPSSYSNVASSSSRLTRALIQTLRSGSMQDALSLFDKMSHCTTFHWNLIIRGYTHNGLFLDALNFYLQMRFQGVPTDYFTYPFVIKACGGLLALKEGEKVHANLFKLGLDEDLYICNALTVMYGKLGHIASALRVFEEMPVRDLVSWNSIITAHSLVQQYFRSLEWFRRMLQVGIRPDKFSLINALEACSLSAYPLGGREVHCYALKLGFDLDVMIQTSLVDMYSKCGMINYADIVFDSISLRNNVAWNAMIGGYSMNGQPLEAFCSLRKMLNDDKLAVDNVTLINLLPSCAQLGAVLEGKSIHGLAIRKGFLPHPVLETALLDMYGELGIPKLAELTFDQMMVKNLVTWNAMISVYVRNGLYKKALKLYEELLSVYHKPDTVTIASILPAYSNLASLRECRQIHGYIVKLHYHSNTFVSNSIIYMYASCGDLAKARQIFDQMPCRDIVSWNTMIMAYAIHAMGRMSIELFSEMKRRGIQPNDSTFVSLLSSCSNSGMVNEGWTYYNSMKLDDGIEPKIEHYGCMLDLIGRTGDLDQAVNFIEEMPLLPTARIWGSLLNASRNKRNIELAEFAAERILSIRHDNTGCYILLSNLYAEAGMWDKVEHIKSVMKMDGAEKTVSCSTVEAKFRLHRFINHDRFHPESDMIYDVQSIISRNTVQKTCIHGATKFKPSGLARRKAKSPEYHSVRLAVCFGLISTALGNPVLVRKNTRICEDCHVVVKRISEITKREIVVGDSKVFHHFRDGHCSCGDYW* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2714 786 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 175 209 IPR002885 -
Aev09g2714 786 Gene3D Tetratricopeptide repeat domain 126 225 IPR011990 GO:0005515
Aev09g2714 786 Gene3D Tetratricopeptide repeat domain 232 331 IPR011990 GO:0005515
Aev09g2714 786 Gene3D Tetratricopeptide repeat domain 28 125 IPR011990 GO:0005515
Aev09g2714 786 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 378 412 IPR002885 -
Aev09g2714 786 Pfam E motif 598 658 IPR046848 -
Aev09g2714 786 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 74 108 IPR002885 -
Aev09g2714 786 TIGRFAM PPR: pentatricopeptide repeat domain 481 514 IPR002885 -
Aev09g2714 786 TIGRFAM PPR: pentatricopeptide repeat domain 453 481 IPR002885 -
Aev09g2714 786 TIGRFAM PPR: pentatricopeptide repeat domain 380 412 IPR002885 -
Aev09g2714 786 TIGRFAM PPR: pentatricopeptide repeat domain 517 549 IPR002885 -
Aev09g2714 786 TIGRFAM PPR: pentatricopeptide repeat domain 78 107 IPR002885 -
Aev09g2714 786 Pfam PPR repeat family 377 423 IPR002885 -
Aev09g2714 786 Pfam PPR repeat family 479 526 IPR002885 -
Aev09g2714 786 SUPERFAMILY TPR-like 319 475 IPR011990 GO:0005515
Aev09g2714 786 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 479 513 IPR002885 -
Aev09g2714 786 Pfam PPR repeat 77 105 IPR002885 -
Aev09g2714 786 Pfam PPR repeat 278 305 IPR002885 -
Aev09g2714 786 Pfam PPR repeat 147 174 IPR002885 -
Aev09g2714 786 Pfam PPR repeat 553 577 IPR002885 -
Aev09g2714 786 Pfam PPR repeat 177 207 IPR002885 -
Aev09g2714 786 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 54 780 - -
Aev09g2714 786 Pfam DYW family of nucleic acid deaminases 717 786 IPR032867 GO:0008270
Aev09g2714 786 PANTHER BNAANNG11600D PROTEIN 54 780 - -
Aev09g2714 786 Gene3D Tetratricopeptide repeat domain 332 442 IPR011990 GO:0005515
Aev09g2714 786 Gene3D Tetratricopeptide repeat domain 491 668 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2714 Aev-Chr9 27959111 27961471 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2714 31 786 Glycoside Hydrolase AT3G49170 32.857 2.44e-130 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2714 - - aip:107619622 1203.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2714 09 27959111 27961471 Aev09g2714 09 27959111 27961471 ECH