Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2518 ATGCAAAACCTCATCTTTCTGTGTCTAACAATCATTGGCCTTAACACAAACAGTTTCCATTATGTGCAAGCTGTGACTTCACCCTCAGACATTGCAGCACTCAAAGCATTCAAAGCCTCAATCAAAGGCTCCTCAATCACACCCTGGTCATGCCTAGCATCATGGAACTTCACCACCGACCCATGCTCAACTCCACGGCGAACCTCCTTCACCTGCGGCCTCACCTGCACCCCTGACTCCACAAGGATCAACCAAATCACCCTCGACCCTGCAGGCTACACAGGAACACTCTCCCCACTAATCTCACAGCTCCCAAGCCTCATCACCCTCGACCTCTCCGACAACTCCTTCTACGGCCCAATACCCTCTTCACTCTCTTCCCTCACCAACCTTCAAACCTTAACCCTCCAATCAAACTCCTTCACCGGCTCAATTCCTCCTTCCATAACCTCCCTCAAATCCCTCGAATCCCTAGACCTTTCACACAATTCCCTTTCTGGGTCCCTCCCAAACACCATGAATTCACTCACCAGCCTCCGCAGAATCGACCTCAGCTTCAACAAGCTCACGGGTTCGATCCCAAATTTACCACCCAACTTGATAAACCTCGCGATCAAGGCCAATTCACTATCTGGGGTTCTTCAAAAACCAACCTTTCAAGGGTTGAACCAATTGGAAGTGGTGGAACTAAGCGATAACGCACTTGGGGGTAAAATCGAAGCGTGGTTCTTCCTTTTACCATCGTTGCAGCAAATTGATTTGGCAAATAACAGCTTCACAGGGGTTGAGATCTCGAGGCCAGTTGGCGTTGGAGGCAGCAACCTCGTGGCGGTGAACCTCGGATTTAACAGAATCCAGGGGAACGCACCCGCGAATATCGGCGCGTATCCGATGCTGTCGTTTCTGTCGATTCGACACAACGCGCTACGTGGCGCGATTCCATTGGAGTACGGGAAAAGCAGGTCGATGAAGAGGCTGTTCCTGGACAGTAACTTCCTGGTGGGGAAGCCTCCGGCGAGGCTAGTGGCGGCCGGCGCGTCGGTTTCCGGCAGCTTGGGTGACAACTGCCTGGAAGGGTGTCCGGTGTCGTCGGAGATGTGCACGACGGCACAGAAATCAAGCTCTGTATGCAAGCAAGCATACCGTGGAAGGCCAACGTCCATAAGGTGGGTCGCCGTCGCCGCTTGCTCTCCTCCCCACCTAGTCCTGCGTCACTGTGCTTCGTTCCTCTTTGCTCTTCGTCGTCGTCGTCTTCGTCTCTCAGAATCAAAGTCCGATCGCAAGTTGGAGAAAAAGATCCAGTTTTATTCCAAGGTGAAAGATACTGTTGCTTCCTTGAGTGCCCAAAAGTCTATTTCCAAGAAGAAGAGTAAACAACAAAGGCGGCAGAAAAAATTGAAGGCATATGACCTCTCATCTCTTGCGGATTTCCTTCCTGAACCCAAGTTGAAGGAACCAAAGAAACCAGGTCTTGGGGATAACTTCAAAGTTAATTGTAAATCTCGGCAAAAGTTGCTATTGGAGGAAGCAAAACATTTTTCTGCTGTTCTTGATAGCCCTGTCTTCCAATCAGATCCCACGTCTGCCATTCATCAACACTTGCAGAATACATTGCCAGTTATAGAGGAACAACCACCCAAGAAAAAGGGGAATAAAAATGGATCCAAGAAGAGGAAGGAGAAGAAATCAAAGGCTTCAACTGGGCTACAGTCTATGGTTATGTAA 1725 0.498 MQNLIFLCLTIIGLNTNSFHYVQAVTSPSDIAALKAFKASIKGSSITPWSCLASWNFTTDPCSTPRRTSFTCGLTCTPDSTRINQITLDPAGYTGTLSPLISQLPSLITLDLSDNSFYGPIPSSLSSLTNLQTLTLQSNSFTGSIPPSITSLKSLESLDLSHNSLSGSLPNTMNSLTSLRRIDLSFNKLTGSIPNLPPNLINLAIKANSLSGVLQKPTFQGLNQLEVVELSDNALGGKIEAWFFLLPSLQQIDLANNSFTGVEISRPVGVGGSNLVAVNLGFNRIQGNAPANIGAYPMLSFLSIRHNALRGAIPLEYGKSRSMKRLFLDSNFLVGKPPARLVAAGASVSGSLGDNCLEGCPVSSEMCTTAQKSSSVCKQAYRGRPTSIRWVAVAACSPPHLVLRHCASFLFALRRRRLRLSESKSDRKLEKKIQFYSKVKDTVASLSAQKSISKKKSKQQRRQKKLKAYDLSSLADFLPEPKLKEPKKPGLGDNFKVNCKSRQKLLLEEAKHFSAVLDSPVFQSDPTSAIHQHLQNTLPVIEEQPPKKKGNKNGSKKRKEKKSKASTGLQSMVM* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2518 574 Gene3D Ribonuclease Inhibitor 198 381 IPR032675 -
Aev09g2518 574 ProSiteProfiles Leucine-rich repeat profile. 178 200 IPR001611 GO:0005515
Aev09g2518 574 SMART LRR_typ_2 246 267 IPR003591 -
Aev09g2518 574 SMART LRR_typ_2 152 175 IPR003591 -
Aev09g2518 574 SMART LRR_typ_2 176 203 IPR003591 -
Aev09g2518 574 SMART LRR_typ_2 128 151 IPR003591 -
Aev09g2518 574 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 18 387 - -
Aev09g2518 574 SUPERFAMILY L domain-like 70 361 - -
Aev09g2518 574 Pfam Leucine rich repeat 129 189 IPR001611 GO:0005515
Aev09g2518 574 Pfam Leucine rich repeat 198 258 IPR001611 GO:0005515
Aev09g2518 574 Gene3D Ribonuclease Inhibitor 28 197 IPR032675 -
Aev09g2518 574 MobiDBLite consensus disorder prediction 537 574 - -
Aev09g2518 574 ProSiteProfiles Leucine-rich repeat profile. 154 176 IPR001611 GO:0005515
Aev09g2518 574 Pfam Ribosome biogenesis protein SLX9 421 537 IPR028160 GO:0000462|GO:0005730|GO:0030686|GO:0030688
Aev09g2518 574 PRINTS Leucine-rich repeat signature 176 189 - -
Aev09g2518 574 PRINTS Leucine-rich repeat signature 155 168 - -
Aev09g2518 574 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 18 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2518 Aev-Chr9 26782940 26787435 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2518 94 380 Receptor kinase-like Gene Family AT5G46330 30.383 7.66e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2518 - - gmx:100801713 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2518 09 26782940 26787435 Aev09g2518 09 26782940 26787435 ECH