Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2517 ATGATGGCACTTGCTCAACCCTCTGCTTCTCTTTCCCTCTCTTCTTTTCGCGATGCTTGTGTCTTCACTGCACCACCAAAATACACTTCCTCTGCTCGCTTTTCTCTACCGAGTGTGGTTCCAACTCGAGCTTCCTTCATTGCCGGTTCCCCAATCTTGATTCGAAGAAGCCATGAAAGGAAAGGTGTATGCAAGGCAATGCCTATTACTATAAGATGTGAGCAAAGTACACAGCAAGGGAACAGTTTGGATGTATGGCTAGGTCGGTTAGCCATGGTTGGCTTTGCAGCAGCCATCTCTGTTGAAATTGCCACTGGCAAGGGACTTCTTGAGAATTTTGGAGTGAATACTCCACTTCCTACAGTTGCCCTGGCAGTAACAGGACTGCTCAACATTGATTCTACAAAAAATCTCCTTCATTTCTTCAGCAGTAGTTTGTGTGATTCCATGGGTAAGATCATATCTCGGTTGGCAAAGAGGTTCTTGCCAAAGACTGAATGGAGGGTTCCAATGGTGGGTCTTGATTCTTCAGGGAAGACTGCCATCCTCTATAAGCTTAAACTGGGTGAAACCGTCAGAACCATACCAACTATTGGGTTTAACGTGGAGAGTTTAGACTACAAAAACGTTGCCGTTACTATCTGGGATATAGGAGGACAACAGAAGATTCGGCCTCTGTGGAGACATTATTTTCACAACACCAGAGGGTTTATATTTGTGGTGGACAGTTATGACAGAGAGAGAATCATAGAAGCTCGTAATGAACTCCATAATATTCTAAGTCATCCTGAACTCTGCAATGCTATACTTCTTGTCCTTGCCAATAAGCAGGATCTACCAAATGCCATGAATGTTGCTGAGCTTGCAGATAAACTTGGCTTACATTCACTTGTTCATCGTAATTGGTACATTCAGAGCACTTCTGCCATCTCAGGCCAAGGGCTCCATCGAGGTCTTGATTGGCTATTGAACAATATATCAACCAGGAAGCATGACATGTGCTGA 1005 0.4418 MMALAQPSASLSLSSFRDACVFTAPPKYTSSARFSLPSVVPTRASFIAGSPILIRRSHERKGVCKAMPITIRCEQSTQQGNSLDVWLGRLAMVGFAAAISVEIATGKGLLENFGVNTPLPTVALAVTGLLNIDSTKNLLHFFSSSLCDSMGKIISRLAKRFLPKTEWRVPMVGLDSSGKTAILYKLKLGETVRTIPTIGFNVESLDYKNVAVTIWDIGGQQKIRPLWRHYFHNTRGFIFVVDSYDRERIIEARNELHNILSHPELCNAILLVLANKQDLPNAMNVAELADKLGLHSLVHRNWYIQSTSAISGQGLHRGLDWLLNNISTRKHDMC* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2517 334 SMART arf_sub_2 150 330 - -
Aev09g2517 334 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 329 IPR027417 -
Aev09g2517 334 SMART sar_sub_1 150 326 IPR006689 GO:0003924|GO:0005525
Aev09g2517 334 Gene3D - 154 333 IPR027417 -
Aev09g2517 334 Pfam ADP-ribosylation factor family 156 326 IPR006689 GO:0003924|GO:0005525
Aev09g2517 334 PRINTS GTP-binding SAR1 protein signature 268 289 IPR006689 GO:0003924|GO:0005525
Aev09g2517 334 PRINTS GTP-binding SAR1 protein signature 196 220 IPR006689 GO:0003924|GO:0005525
Aev09g2517 334 PRINTS GTP-binding SAR1 protein signature 223 248 IPR006689 GO:0003924|GO:0005525
Aev09g2517 334 PRINTS GTP-binding SAR1 protein signature 168 191 IPR006689 GO:0003924|GO:0005525
Aev09g2517 334 PANTHER ADP-RIBOSYLATION FACTOR 2-LIKE ISOFORM X1 150 329 - -
Aev09g2517 334 ProSiteProfiles small GTPase Arf family profile. 160 326 - -
Aev09g2517 334 PANTHER ADP RIBOSYLATION FACTOR-RELATED 150 329 IPR024156 GO:0005525
Aev09g2517 334 SUPERFAMILY Chlorophyll a-b binding protein 84 125 - -
Aev09g2517 334 TIGRFAM small_GTP: small GTP-binding protein domain 167 293 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2517 Aev-Chr9 26779406 26782500 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2517 K07937 - jre:108996172 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2517 09 26779406 26782500 Aev09g2517 09 26779406 26782500 ECH