Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2515 ATGGCCACCGCATTTTCCCACCAAACCCTTCGAATCTCTTCTTCTTCTTCTTCTTCCAATTCACTTTCTCTCTCCTCCAAGCTTCCTCTTTCCTCCGCCTTCTCTGTCTCCTTTCCTACTCACCGCCGCGCCGGCCGATCGCTCGTGGTGCTGGTTTCCGCCGGCCTCGACGCCAAGCCAACCGTCCTCGTCGCCGAGAAGCTCGGTGAGGCTGGGCTTAAGCTGCTGAAGGAGTTCGCGAACGTGGATTGCAGCTACAACCTCAGCCCCGAGGAGCTCTGCACGAAGATCTCGCTGTGTGACGCGCTGATCGTGCGGAGTGGCACTAAGGTCACGCGCGAGGTGTTTGAGTCCTCCGCCGGCAGGCTCAAGGTCGTTGGAAGGGCAGGTGTCGGGATCGACAATGTGGATCTGGCTGCCGCCACAGAACATGGATGCCTTGTCGTCAATGCGCCCACCGCCAACACCGTCGCCGCCGCTGAGCACGGGATCGCGCTCCTCGCTGCCATGGCCAGGAACGTTGCTCAGGCTGATGCGTCTGTTAAAGCTGGGAAATGGCAGAGGAACAAGTACGTGGGAGTTTCCCTGGTTGGGAAAACACTGGCTGTGTTGGGATTTGGGAAGGTTGGTTCCGAAGTTGCTCGCCGTGCCAAGGGGCTTGGTATGAATGTCATTGCACATGATCCTTATGCTCCTGCTGACCGTGCTCGTGCGATTGGAGTGGAGCTTGTGAGCTTTGATGAGGCCATTGCCACTGCAGATTTCATCTCTTTGCACATGCCTCTTACGCCTGCTACATCAAAGATGCTCAATGATGAGACTTTTGCGAAGATGAAGAAAGGAGTTCGTATAGTCAATGTTGCTCGTGGTGGAGTCATTGATGAGGATGCTCTTGTTAGGGCACTGGATTCTGGAATTGTAGCTCAGGCGGCACTTGATGTTTTCACAGTGGAGCCACCCCCGCCGGACAACAAGTTGGTCCTGCATGAGCAAGTTACTGCAACACCTCATCTTGGTGCCAGTACCATGGAAGCCCAGGAAGGAGTGGCTATTGAAATAGCAGAAGCTGTCGTTGGAGCACTACAAGGGGAGCTTGCTGCCACTGCTGTCAATGCACCTATGGTTCCCTCAGAGGTGTTGACAGAGTTGAAACCATTTGTTGATCTTGCTGAGAAACTAGGGAGGCTGGCTGTCCAGTTGGTAGCAGGAGGTAGCGGTGTAAAAACGGTGAAAGTGACCTATGCTTCTTCAAGGGCTCCTGATGATCTTGACACTCGTGTTATTCGCGCCATGATAACCAAGGGTCTGATTGAGCCCATATCCAGTGTCTTCGTGAACCTGGTTAATGCTGATTTCACTGCTAAGCAAAGAGGGCTTAGGATTACCGAGGAGAGAGTCATTCTTGATGGTTCACCTGAGAGCCCACTTGAATACATCCAGGTTCAAATTGCTAATGTGGAATCCCGATTCGCTAGTGCTATATCAGATTCTGGTGAGATCAAAGTTGAGGGGAGAGTGAAGGATGATATCCCTCATCTGACAAAGGTTGGATCCTTTGAAGTTGATGTGAGCTTGGAAGGCAGCATTATTCTGTGCAGGCAGGTGGATCAGCCAGGCATGATCGGAAAGGTTGGTAGCGTTTTGGGCGAGGAGAATGTGAACGTCAGCTTCATGAGTGTCGGAAGGATTGCTCCTCGTAAGCAAGCTGTGATGGCAATTGGGGTGGACGACCAACCTTCCAAGGAAACTTTGAAGAAGATTGGAGAAATTCCTGCCATTGAAGAGTTCGTCTTCCTCAAAGTGTAG 1806 0.5238 MATAFSHQTLRISSSSSSSNSLSLSSKLPLSSAFSVSFPTHRRAGRSLVVLVSAGLDAKPTVLVAEKLGEAGLKLLKEFANVDCSYNLSPEELCTKISLCDALIVRSGTKVTREVFESSAGRLKVVGRAGVGIDNVDLAAATEHGCLVVNAPTANTVAAAEHGIALLAAMARNVAQADASVKAGKWQRNKYVGVSLVGKTLAVLGFGKVGSEVARRAKGLGMNVIAHDPYAPADRARAIGVELVSFDEAIATADFISLHMPLTPATSKMLNDETFAKMKKGVRIVNVARGGVIDEDALVRALDSGIVAQAALDVFTVEPPPPDNKLVLHEQVTATPHLGASTMEAQEGVAIEIAEAVVGALQGELAATAVNAPMVPSEVLTELKPFVDLAEKLGRLAVQLVAGGSGVKTVKVTYASSRAPDDLDTRVIRAMITKGLIEPISSVFVNLVNADFTAKQRGLRITEERVILDGSPESPLEYIQVQIANVESRFASAISDSGEIKVEGRVKDDIPHLTKVGSFEVDVSLEGSIILCRQVDQPGMIGKVGSVLGEENVNVSFMSVGRIAPRKQAVMAIGVDDQPSKETLKKIGEIPAIEEFVFLKV* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2515 601 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 62 371 IPR006139 GO:0016616|GO:0051287
Aev09g2515 601 Gene3D - 376 527 IPR029009 -
Aev09g2515 601 SUPERFAMILY Serine metabolism enzymes domain 377 523 IPR029009 -
Aev09g2515 601 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 164 339 IPR006140 GO:0051287
Aev09g2515 601 Gene3D - 155 337 - -
Aev09g2515 601 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 201 228 IPR029752 -
Aev09g2515 601 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 249 271 IPR029753 -
Aev09g2515 601 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 59 192 - -
Aev09g2515 601 PANTHER D-3-PHOSPHOGLYCERATE DEHYDROGENASE 32 594 - -
Aev09g2515 601 SUPERFAMILY ACT-like 519 597 IPR045865 -
Aev09g2515 601 SMART AdoHcyase_NAD_2 189 343 IPR015878 -
Aev09g2515 601 CDD PGDH_4 62 364 - -
Aev09g2515 601 PANTHER FORMATE DEHYDROGENASE 1 32 594 - -
Aev09g2515 601 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 340 IPR036291 -
Aev09g2515 601 TIGRFAM PGDH: phosphoglycerate dehydrogenase 62 598 IPR006236 GO:0004617|GO:0006564
Aev09g2515 601 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 278 294 IPR029753 -
Aev09g2515 601 Gene3D - 528 600 - -
Aev09g2515 601 Gene3D - 64 364 - -
Aev09g2515 601 ProSiteProfiles ACT domain profile. 529 601 IPR002912 -
Aev09g2515 601 Pfam D-3-phosphoglycerate dehydrogenase intervening domain 382 487 IPR045626 -
Aev09g2515 601 Pfam ACT domain 529 590 IPR002912 -
Aev09g2515 601 CDD ACT_3PGDH-xct 530 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2515 Aev-Chr9 26770626 26774640 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2515 K00058 - gmx:100808771 1001.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2515 09 26770626 26774640 Aev09g2515 09 26770626 26774640 ECH