Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2467 ATGGCATCTTCGTTCTTATTACCGCTCTCCGCCCCAACTCTACCCTTCATCGACGATTCTGCCTCTTCTTCTCTTCGCCCCAGCTCCTCCTTCTTCAATGGAACCAAGCTGTTTCCTTGCGCCCCTCCTTCTGCCAGGGCCAGACTGCCACGAAGAAGGTGCTTCGTGCCTCCTTCTGCCATGTCTTCCTTCGACCACATCCCCAAGCAGTTCAGGGAAGAAAATCTCAAGGATGGATTGATGGACAATTACAAGAACACACCAAAACATCTATATGGCCTTACTCCTTCACAGATGGACATGTTCATGACAGAAGATAATCCTATCCGCAAGCAGTCTGAAAGTGTTACAGAGGAAAGCATCTCATCTGCCAAAAATTATTTGGATAATGGTGGGATGTGGACTCTATCTGGCATGGGCGATAGAGGCCCTTCAAAATACAGCATGAGTGTTAGTATGTATCGAGGAGGTGGTAGGGGAAGTGGAAGGCCTAGAACTGCTCCACCAGATCTGCCCTCTTTGCTCTTGGATGCTCGAATATGCTACCTGGGTATGCCGATTGTACCGGCTGTAACAGAACTTCTTGTCGCTCAACTTATGTGGTTGGATTATGATAACCCTTCTAAACCTATATACTTATATATCAATTCATCTGGGACTCAGAATGAGAAGAATGAGACCGTGGGATCAGAAACTGAGGCATATTCGATAGCTGATATGATTTCTTATATCAAATCCGATGTCTATACTGTGAATTGTGGCATGGCATATGGGCAAGCAGCAATGCTTCTGTCACTTGGAACAAAGGGTTACCGTGCTGTACAGCCAAACTCATCTACAAAATTATATCTACCAAAAGTCAACAGATCAAGTGGTGCTGTTATAGATATGTGGATCAAGGCAAAAGAGCTGGATGCAAGTACAGAGTCTTACATTGAGCTCTTAGCGAAAGGAATAGGGAAACCGAAGGAAGAAATTACTAAAGAAATCCAGAGGCCTAAATATTTTAGAGCACAGGAAGCAATAGACTACGGGATTGCTGACAAAATAATCGATTCTAGGGACATCGCATTTGACAAGCGGAATTATGATGAAATGCTTGCTCAATCAAGAGCTACGAGGAGACAAGCTGGCGGCAATCCTCAAGTGGCTCCTTCGGGATTTAGGGAAGAAGCAAAACAATTGGGTAATCGTGTTGTTGGTTATCAGATTCAATTTGCTCTACAACATCTCACACTCACTGCCTTGACAAACAAAATGGAGAAAACATTGCTCACAGCTAGTAGTAACTAG 1293 0.4424 MASSFLLPLSAPTLPFIDDSASSSLRPSSSFFNGTKLFPCAPPSARARLPRRRCFVPPSAMSSFDHIPKQFREENLKDGLMDNYKNTPKHLYGLTPSQMDMFMTEDNPIRKQSESVTEESISSAKNYLDNGGMWTLSGMGDRGPSKYSMSVSMYRGGGRGSGRPRTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQLMWLDYDNPSKPIYLYINSSGTQNEKNETVGSETEAYSIADMISYIKSDVYTVNCGMAYGQAAMLLSLGTKGYRAVQPNSSTKLYLPKVNRSSGAVIDMWIKAKELDASTESYIELLAKGIGKPKEEITKEIQRPKYFRAQEAIDYGIADKIIDSRDIAFDKRNYDEMLAQSRATRRQAGGNPQVAPSGFREEAKQLGNRVVGYQIQFALQHLTLTALTNKMEKTLLTASSN* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2467 430 CDD S14_ClpP_2 170 350 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aev09g2467 430 Pfam Clp protease 172 353 IPR023562 -
Aev09g2467 430 PRINTS Clp protease catalytic subunit P signature 170 185 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aev09g2467 430 PRINTS Clp protease catalytic subunit P signature 210 230 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aev09g2467 430 PRINTS Clp protease catalytic subunit P signature 250 267 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aev09g2467 430 PRINTS Clp protease catalytic subunit P signature 329 348 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aev09g2467 430 Gene3D - 159 359 - -
Aev09g2467 430 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 56 381 IPR023562 -
Aev09g2467 430 SUPERFAMILY ClpP/crotonase 165 356 IPR029045 -
Aev09g2467 430 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT-RELATED PROTEIN 1, CHLOROPLASTIC 56 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2467 Aev-Chr9 26524079 26527636 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2467 K01358 - jre:109008849 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2467 09 26524079 26527636 Aev09g2467 09 26524079 26527636 ECH