Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2447 ATGCAGGGGAATGTTGTTCGTGTAAAAGGTGATGAGTTCTGGCATATGACAAAAGTATTGAGGTTGTGTGCCAATGACAGGGTAGAGCTCTTCAATGGGAAGGGAGGTTTGGTAGAAGGATGCATACAGAACATTGATCGTACTGGACTTGATTTTGTTGCATTGAATGATCCAAAGTTAGTACCTCTACAGAACACACAGCTGCATGTATTTGCTGGTTTTGGTACTTTGAAGGGTGGCCGTGCTGACTGGCTTGTAGAGAAGTGCACAGAACTTGGAGCCATTAGTGTGACTCCACTACTCACTGAACGTTCTCCATCAATCTCAGAAAATCGGGTGGACAGATTGGAACGTGTGATTTTAGCAGCATCTAAACAATCTCAACGACTACATGAAATGGTTCTTAAACCTCCTGTAGAGATTGATGACGTTTTGCATCTTATTGCACAAACAAAGCTTTCTCTCCTTGCAACAGCAAAAGCGACTCCTCTTCTTAGTGCATTGACGTCATTTAAAAAGGAAACTAGTGGCTTAATCATAATTGGACCTGAAGGAGACTTCACTGAGAAAGAAGTGAGTATGATGATGGAAGCAGGTGCTACGGCTGTTAGTCTTGGGCCTCATCGTCTCCGGGTTGAAACCGCCGCAGTAGCACTTCTATCAACTGTGATGTTATGGTCTGACTCTTAG 690 0.4362 MQGNVVRVKGDEFWHMTKVLRLCANDRVELFNGKGGLVEGCIQNIDRTGLDFVALNDPKLVPLQNTQLHVFAGFGTLKGGRADWLVEKCTELGAISVTPLLTERSPSISENRVDRLERVILAASKQSQRLHEMVLKPPVEIDDVLHLIAQTKLSLLATAKATPLLSALTSFKKETSGLIIIGPEGDFTEKEVSMMMEAGATAVSLGPHRLRVETAAVALLSTVMLWSDS* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2447 229 Gene3D - 1 228 IPR029026 -
Aev09g2447 229 TIGRFAM TIGR00046: RNA methyltransferase, RsmE family 5 224 IPR006700 GO:0006364|GO:0008168
Aev09g2447 229 Pfam RNA methyltransferase PUA domain 9 53 IPR046887 -
Aev09g2447 229 PANTHER RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE E 2 228 IPR006700 GO:0006364|GO:0008168
Aev09g2447 229 PIRSF MTase_slr0722 1 229 IPR006700 GO:0006364|GO:0008168
Aev09g2447 229 SUPERFAMILY PUA domain-like 3 52 IPR015947 -
Aev09g2447 229 SUPERFAMILY alpha/beta knot 66 227 IPR029028 -
Aev09g2447 229 Pfam RNA methyltransferase domain 66 223 IPR046886 -
Aev09g2447 229 CDD RsmE-like 68 221 IPR046886 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2447 K09761 - gmx:100777253 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2447 09 26408381 26410231 Aev09g2447 09 26408381 26410231 ECH